Sequence 1: | NP_001097755.1 | Gene: | GCC185 / 41459 | FlyBaseID: | FBgn0037979 | Length: | 1135 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001157935.1 | Gene: | RGPD8 / 727851 | HGNCID: | 9849 | Length: | 1765 | Species: | Homo sapiens |
Alignment Length: | 1489 | Identity: | 276/1489 - (18%) |
---|---|---|---|
Similarity: | 511/1489 - (34%) | Gaps: | 486/1489 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 AKDELTEENHRLKDALKRAAEKQSSLPAMQEMVQDFTDK--------NLILTEEVNNLKRKTKED 97
Fly 98 ADRLTQFEIENESLKR-QLGRLSDENDAL------------LANVDRMEKAMQQV--------NA 141
Fly 142 LGNEQRKNLELLEVDIAKIKEAEAENASLRQQVATMEEESSVLQQKYQNIKELNSEQRKKFNSLK 206
Fly 207 DRFIDVHRKL--KNLKECKCVLLETQHE------------YAASVSKW----------------Q 241
Fly 242 VEIIKASQLLCAKMASLQAENEKLKLNNGKSDNNPQTIDTGIDRKRLLQRVQEMD-RLAKIVKQK 305
Fly 306 QKNQRS-------NLNVEYLLKKITALEELAVIIKQQ------HR----IDKEQLISVTKEQENT 353
Fly 354 KNHARNLNVSLFQTKLDQMQNLVKVIAKERDNQQ--RKL--------QELEAICIELR------- 401
Fly 402 --------------QHNEDLLTRYHLKEQEHGELLTEMRELNEALKGRGDAISRLQEQHEAEVKR 452
Fly 453 QRDLEAQLSNSQQAAQEKLQKIKQLQSRVEELEQANADAQSDVLSTSTISRAEELSRLRELDEGY 517
Fly 518 EEKYHKLRAIAAKLKKKLQEQTQQLNEMEQSGALKEELEAIKLAQAQLQQDLNAARAENQKLKSK 582
Fly 583 EKVKHSSVLNL-EIEAAEKS----LSEVSAKLT----AKSSELEAVK------------------ 620
Fly 621 -----ESLASKENT-----------------------IVQLRKEIAILEEAKNGEAAHSLELKEQ 657
Fly 658 IDRMQVQV--------------KDAVHSKQQAL-----------------TQN------------ 679
Fly 680 ---KDLEHGVEQAKLEAEQLRLQLSESAQQYESKLNTATQQLLSQTQELEMHLAEQKRLETALRN 741
Fly 742 AERALEDLRVEYTEYKLKAQSVLRKNQNKGS-----------------NREQELEEELVALRESE 789
Fly 790 RNLRASNDG-RAARLA--------------------------QLDSQIEELRQDNTDLQKRSKEL 827
Fly 828 VSLVDELRQQ--------NDLLSL---ENQRQLQFQH----------------------DLMQQH 859
Fly 860 ----------RQQVDELDAGHQL------------------------------------------ 872
Fly 873 --QLTQVQEQLEEAQKMQANVSQHTTASAASVDTSPEQA---KIDYLLMDHET--GLDGHAGDVS 930
Fly 931 LAQLAAQRKISTASRRSHDFM---PLDELLNTSMNQITS----------DTVTTISNFG------ 976
Fly 977 --------RSVSQQ------EDEEAEMAARGD---------------FSVQSAQL---------- 1002
Fly 1003 ------QATKERLSIQESR-----VKHLTALLAENEQDLAKLTQMNDMLKEELRRQERSEEREQH 1056
Fly 1057 MHNSEYLKNVFLKFLTLNNVDERQRLVPVLNTILRLSRNEMEMLNCVAKGQKVSADGSS 1115 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GCC185 | NP_001097755.1 | SMC_prok_B | 35..813 | CDD:274008 | 176/1024 (17%) |
TMPIT | 458..>548 | CDD:285135 | 15/89 (17%) | ||
GRIP | 1058..1100 | CDD:279767 | 22/41 (54%) | ||
RGPD8 | NP_001157935.1 | TPR 1 | 26..59 | ||
TPR_11 | 59..126 | CDD:290150 | |||
TPR repeat | 59..89 | CDD:276809 | |||
TPR 2 | 60..93 | ||||
TPR_1 | 60..92 | CDD:278916 | |||
TPR 3 | 648..681 | 6/35 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 760..804 | 5/45 (11%) | |||
YRB1 | 975..1167 | CDD:227499 | 29/195 (15%) | ||
RanBD2_RanBP2-like | 1051..1167 | CDD:269998 | 19/119 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1216..1247 | 5/30 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1306..1330 | 5/23 (22%) | |||
RanBD3_RanBP2-like | 1348..1464 | CDD:270204 | 11/115 (10%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1580..1621 | 6/40 (15%) | |||
Rab_bind | 1641..1705 | CDD:293309 | 24/64 (38%) | ||
GRIP | 1707..1749 | CDD:279767 | 22/41 (54%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1746..1765 | 5/19 (26%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 46 | 1.000 | Domainoid score | I12111 |
eggNOG | 1 | 0.900 | - | - | E1_COG5171 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm41740 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.900 |