DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GCC185 and numa1

DIOPT Version :9

Sequence 1:NP_001097755.1 Gene:GCC185 / 41459 FlyBaseID:FBgn0037979 Length:1135 Species:Drosophila melanogaster
Sequence 2:NP_001316910.1 Gene:numa1 / 572344 ZFINID:ZDB-GENE-110517-1 Length:2450 Species:Danio rerio


Alignment Length:1459 Identity:308/1459 - (21%)
Similarity:564/1459 - (38%) Gaps:458/1459 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KKAKQAKDELTEENHRLKDALKRAAEKQSSLPAM------------------------------- 69
            :|.||...:||.:..:|::::....:|::.:.|:                               
Zfish   410 EKLKQELADLTLQLAQLQESISHLEKKKAEVEALLAEERCSFEKETARLQLVVFDLEKSINSIRL 474

  Fly    70 -QEMVQDF--TDKNLILTEEVNNLKRKTKEDADRLTQFEIE---NESLKRQLGRLSDENDALLAN 128
             :|.:|:.  |.|.: |:.:::.|:|    |..||.|.|::   ...:...|.:..:|.:..:|:
Zfish   475 ERETLQEALKTQKEM-LSAQISALER----DVSRLQQVEVQLTAEIKISADLRQQREELEGKVAS 534

  Fly   129 VDRM-------------EKAMQQ--VNALGNE---QRKNLELLEVDIAKIKEAEAENASLRQQVA 175
            :|||             |:|.||  :|:|.::   .|..::..|..:.:.::..|||.||:.:..
Zfish   535 LDRMVHSLHAEIQGLEVERASQQDAINSLISDLQIARATVQEYEKKLEEHQKVVAENNSLKNEAC 599

  Fly   176 TMEEE------------SSVLQQKYQNIKELN--SEQRKKFN-------------SLKDRFI--- 210
            ||::|            :.|.:.:::..:|.|  ||...|..             ||||..|   
Zfish   600 TMQQELNNHLKAIGDLQAEVNELRFEKTEEENKVSEALVKIESLQTEILHLCEKISLKDEEIRNL 664

  Fly   211 -----DVHRKLKNLK----ECKCVLLETQHEYAASVSKWQVEIIKASQ----------LLCAKMA 256
                 .|..:||.:|    |...::...:.|:..:|.|.|.|:..|:.          :|.|::.
Zfish   665 TKEYESVDNELKLVKEQNVEINAMIKSNRKEHEETVEKLQQELHCAASAASEKQEQMLVLSAEVT 729

  Fly   257 SLQ------AENEK---------------LKLNNGKSDNNPQTIDTGIDRKR-----LLQRVQEM 295
            ||:      :|||.               ||.|.....|......|...:|.     |.|.:...
Zfish   730 SLKEQICRYSENEAQKQQELSILEAQHNVLKENLTSLQNQLAEATTSASQKESEFILLQQELSHQ 794

  Fly   296 DRLAKIVKQKQKNQRSNLN--VEYLLKKI-----TALEELAVIIKQQHRIDKEQLISVTKEQENT 353
            :.|.:..::.:|.:|..|.  |..|..||     .|.|..|.:...|:.: |:||....:.:.:.
Zfish   795 ETLREQTQELEKIKREELEGIVSELQAKIIEVSSIASEREACVSSLQYEM-KDQLSKAKQCEADL 858

  Fly   354 KN-------------------------HARNLNVSLFQTKLDQMQNLVKVIAKERDNQQ------ 387
            :|                         |..:||.||.|.:|...|...::||.::..||      
Zfish   859 RNEMKEKVGNLQELLDAANHGIAEKEHHLESLNQSLKQMELLYCQKEEEIIASQQAKQQLENNIA 923

  Fly   388 ---RKLQELEAICIELRQHNEDLLTR-------YHLKEQEHGELLTEMRELNEALKGRGDAISRL 442
               ::|.|::.....||...:.|.||       .|..:|:..:|.|:...|.|.|....|.:.:.
Zfish   924 EQKQQLDEIQQNREILRNERDHLSTRVSSLQEEIHRSQQDFSDLQTDHNVLKEKLVNLQDQVEQA 988

  Fly   443 Q---EQHEAEVKRQRDLEAQLSNSQQAAQEKLQ-----------KIKQLQSRVEELEQANADAQS 493
            .   .|.|:|:..   |:.:||:.:...::.|:           |:|:||.|:.|:....:..::
Zfish   989 MITASQKESELLL---LQQELSHQETLREKALELEAIKREEFEKKVKELQDRILEVSTLASQREA 1050

  Fly   494 DVLSTSTISRAEELSRLR------------------ELD---EGYEEKYHKLRAIAAKL------ 531
            .|:|.....|.::||..:                  |||   ....:|.|:|.::..||      
Zfish  1051 QVISLENEMRDQQLSANQSKDNLCREWQEKLGILKGELDVVSRDAADKDHQLESLDQKLKEMEMV 1115

  Fly   532 --------------KKKLQEQTQQLNEMEQS---------------GALKEELEAIKLAQAQLQQ 567
                          |:.|:::..:|.|.:|.               .:||||:.:.:..|.|.||
Zfish  1116 VLQKEKDVMETHQAKEDLEKRIAELEECKQKLEIMRNERDHLSTEVASLKEEIHSYQDTQMQKQQ 1180

  Fly   568 DLNAARAENQKLKSKEKVKHSSVLNLEIEAAEKSLSEVSAKLTAKSSELEAVKESLASKENTIVQ 632
            .::....||..||.            .:.|.||.|:|.....:.|:|||:.             :
Zfish  1181 TISVLEVENNALKE------------NMAALEKQLAEEITTASQKNSELQN-------------K 1220

  Fly   633 LRKEIAILEEAKNGEAAHSLELKEQIDRMQVQV---------KDAV-HSKQQALTQNKDLEHGVE 687
            |.::.::.|:|:..|.....|.:.::..:|.:|         |:|| :|.|:.||       |..
Zfish  1221 LHQQESLHEKAQELEIGRHEEFERRVRELQAKVQEVSTLASEKEAVAYSLQEELT-------GHL 1278

  Fly   688 QAKLEAEQLRLQLSESAQQYESKLNTAT----------QQLLSQTQELEMHLAEQKRLETALRNA 742
            :||:..:.||..|.|..:..:.::.||:          |.|..:.:::|| |.:||  |.|:...
Zfish  1279 KAKVSEDDLRRVLEEKVETLQREIETASCDATSKDGLLQTLDQKLRQMEM-LCQQK--EDAVFEI 1340

  Fly   743 ERALEDLRVEYTEYKLKAQ---------SVLRKNQNKGSNREQELEEELVALRESERNLRASNDG 798
            :.:.|||:.|..|...|.|         .:::|.::..||....|:|::     ::::|||....
Zfish  1341 QNSKEDLQKEMNELVSKNQELEGCLQHLEMVKKEKDLLSNEVTSLKEQI-----NDQSLRAKQSE 1400

  Fly   799 R------AARLAQLDSQIEELRQDNTDLQKRSKEL---VSLVDELRQQ--NDLLSLENQRQ-LQF 851
            .      ..::..|..|:|....|.:|.:|..:.|   ||.:|.|.||  |.:|.::|.:: ||.
Zfish  1401 ADLCIVFEEKIETLQGQLESSSCDVSDKEKHLQTLHQKVSQMDLLCQQKENAVLEMQNAKEDLQK 1465

  Fly   852 QHDLMQQHRQQVD-----------ELDAGHQLQLTQVQEQLEEAQKMQANVSQ------------ 893
            :.|.:...:||::           |.|. ...::|.:::||.: |.::|..|:            
Zfish  1466 KIDELVSEKQQLEGCLQNLEMVKSERDL-LSTEVTSLKDQLND-QDLKAKQSEDDLRKVLEEKIK 1528

  Fly   894 --HTTASAASVDTSPEQ----------AKIDYL----------LMDHETGLDGHAGDVSL--AQL 934
              ......||.|.|.:.          .::|.|          |:..:..|:...|::::  .||
Zfish  1529 NLQGQLETASRDVSEKDQLLQTLDQKVTQMDQLCKQKEKYALDLLQVKENLEKRIGEITVEKQQL 1593

  Fly   935 -AAQRKISTASRRSHDFMPLDELLNTSMNQITSDTVTTISNFGRSVSQQEDEEAEMAARGDFSVQ 998
             ..|:.:.|.|:..      |.||    |::|.          ..|..|..:|.|:..:.:.||.
Zfish  1594 EGCQQNLETVSKDK------DNLL----NELTF----------LKVEIQSYQEKEVQMKHELSVL 1638

  Fly   999 SAQLQATKERLSIQESRVKHLTALLAENEQDLAKLTQMNDMLKEELRRQER-------------- 1049
            ..:....:|.|...:.:|..|||..::.|.:|.......:.|:|:.::.|:              
Zfish  1639 ENEHNILQENLDTLQKQVVELTASASQKESELQNEVCKQEKLQEKAQKLEKDAGDLQAKILEIST 1703

  Fly  1050 -SEEREQHMH------NSEYLK---------NVF----------LKFLTLNNVDERQRLVPVLNT 1088
             :.|||..:.      ||::||         .||          |:...| :|.::.:|:..||.
Zfish  1704 LASEREAQISSLKDEINSQHLKAKQSEDDLLRVFEEKIENLQGQLEIARL-DVSDKDQLLQTLNQ 1767

  Fly  1089 ILRLSRNEMEML-----NCVAKGQKVSAD 1112
            .|:    :||.|     .||.:..:...|
Zfish  1768 KLK----QMEELCKQKETCVLEMHQTKED 1792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCC185NP_001097755.1 SMC_prok_B 35..813 CDD:274008 224/1059 (21%)
TMPIT 458..>548 CDD:285135 26/141 (18%)
GRIP 1058..1100 CDD:279767 15/66 (23%)
numa1NP_001316910.1 SCP-1 176..919 CDD:114219 107/514 (21%)
Myosin_tail_1 840..1772 CDD:279860 212/1002 (21%)
DUF4515 1707..1913 CDD:291649 22/91 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583923
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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