DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCC185 and gcc2

DIOPT Version :9

Sequence 1:NP_001097755.1 Gene:GCC185 / 41459 FlyBaseID:FBgn0037979 Length:1135 Species:Drosophila melanogaster
Sequence 2:XP_002937710.3 Gene:gcc2 / 100158612 XenbaseID:XB-GENE-5886610 Length:1867 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCC185NP_001097755.1 SMC_prok_B 35..813 CDD:274008
TMPIT 458..>548 CDD:285135
GRIP 1058..1100 CDD:279767
gcc2XP_002937710.3 Smc <7..400 CDD:224117
Smc 242..1084 CDD:224117
SMC_prok_B 909..1664 CDD:274008
Rab_bind 1731..1795 CDD:293309
GRIP 1797..1839 CDD:396170
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I11978
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I3448
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007273
OrthoInspector 1 1.000 - - oto104512
Panther 1 1.100 - - LDO PTHR18902
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.150

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