DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT1G74510

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_177591.1 Gene:AT1G74510 / 843792 AraportID:AT1G74510 Length:451 Species:Arabidopsis thaliana


Alignment Length:344 Identity:87/344 - (25%)
Similarity:127/344 - (36%) Gaps:87/344 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 EELIRSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEI 311
            ::::|..|..|...|:..|         .||..:|.|.|.:...|     ||    |:..|:   
plant    51 KKMLRVDHGSRGESDKITD---------SLQLAKTYQSSNQSQQG-----GG----GDQQSS--- 94

  Fly   312 YDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTER-----LSTVEVYDPRKNKWSQGCA 371
              |:|:.    :|.:::.     .:.:..|..||....|.|     :...|:|..|:.|      
plant    95 --PVTRL----DQNALLN-----CLAHCSLSDFGSIASTNRTFRSLIKDSELYRLRRAK------ 142

  Fly   372 MLCKRSAVGVAALDDCIYV-CGGYDGVTSLNTVEVYYPKSNTWKTVAQMM---------KYRSAG 426
                    |:  ::..||. |       .|...|.|.|..:.|..|.:|.         |...|.
plant   143 --------GI--VEHWIYFSC-------RLLEWEAYDPNGDRWLRVPKMTFNECFMCSDKESLAV 190

  Fly   427 GVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCG- 490
            | |:|..:...:..|       .:.||....:.|.....|...||..|.|:| |:|.|..|.|. 
plant   191 G-TELLVFGKEIMSH-------VIYRYSILTNTWTSGMQMNVPRCLFGSASL-GEIAVIAGGCDP 246

  Fly   491 -NSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWAIGGYDGESN---LSTVEVYDPET 551
             ...|.|.|.|:.:|..|.::..||..|...:.....|..:.|||. ||.|   |...||||.:.
plant   247 RGRILSSAELYNSETGEWTVIPSMNKARKMCSSVFMDGNFYCIGGI-GEGNSKMLLCGEVYDLKK 310

  Fly   552 DKWTFMPPMCAH--SGGVG 568
            ..||.:|.|...  |||.|
plant   311 KTWTLIPNMLPERSSGGGG 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 64/279 (23%)
KELCH repeat 329..372 CDD:276965 9/47 (19%)
KELCH repeat 376..417 CDD:276965 9/41 (22%)
KELCH repeat 423..466 CDD:276965 8/42 (19%)
KELCH repeat 470..514 CDD:276965 16/45 (36%)
Kelch_1 517..560 CDD:396078 16/45 (36%)
KELCH repeat 517..560 CDD:276965 16/45 (36%)
AT1G74510NP_177591.1 F-box_SF <105..139 CDD:459239 7/38 (18%)
NanM 158..407 CDD:442289 55/182 (30%)
KELCH repeat 226..271 CDD:276965 16/45 (36%)
KELCH repeat 274..320 CDD:276965 16/46 (35%)
KELCH repeat 323..383 CDD:276965 4/7 (57%)
Blue background indicates that the domain is not in the aligned region.

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