DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT1G67480

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_176915.1 Gene:AT1G67480 / 843069 AraportID:AT1G67480 Length:376 Species:Arabidopsis thaliana


Alignment Length:346 Identity:83/346 - (23%)
Similarity:144/346 - (41%) Gaps:63/346 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 LADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGE 304
            |.|.||:        ||..|:..|:    .|....:.:.:|...:|.||.|  :..:.|:.....
plant    43 LPDDVAK--------QCLALVPRAR----FPSMGSVCKKWRFVVQSKEFIT--VRRLAGMLEEWL 93

  Fly   305 SVSTVEIYDPLTKKWK----MGEQMSMMRSRVG-------VAVLNGKLYAFGG---FNGTERLST 355
            .|.|:.. .....:|:    :|:::|.:....|       |.|::|||....|   .||:...|.
plant    94 YVLTMNA-GGKDNRWEVMDCLGQKLSSLPPMPGPAKTGFKVVVVDGKLLVIAGCCMINGSLVASA 157

  Fly   356 -VEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGY--DGVTSLNTVEVYYPKSNTWKTVA 417
             |..||...|.||:...:...|.....|.::..:||.||:  || .||::.|||.|::.||..:.
plant   158 DVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDG-ESLSSAEVYDPETCTWTFIE 221

  Fly   418 QMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRC--------RLG 474
            .:.:.|.....:..||.:|.:||....:|.:|            |:..:.|.:|        .|.
plant   222 SLRRPRWGCFASAFNGKLYVMGGRSNFTIGNS------------KLLDVYNTQCGSWHGSKNGLT 274

  Fly   475 VATLN---GKIYVCGGYCGNSFLRSVECYDPQTDTWKLVT-PMN-CKRSRVALAANMGKLWAIGG 534
            :.|.:   ||...|..:..:   |.:..::.:.:||::|. |:: ..|:........|||.....
plant   275 MVTAHVEVGKKLFCIDWKNH---RKMSVFNAEDETWEVVALPLSGSSRAGFQFGKLSGKLLLFSS 336

  Fly   535 YDGESNLSTVEVYDPETDKWT 555
            .: |:...|: :|||:....|
plant   337 QE-ETGQCTL-LYDPDASPGT 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 71/297 (24%)
KELCH repeat 329..372 CDD:276965 16/53 (30%)
KELCH repeat 376..417 CDD:276965 16/42 (38%)
KELCH repeat 423..466 CDD:276965 9/42 (21%)
KELCH repeat 470..514 CDD:276965 11/55 (20%)
Kelch_1 517..560 CDD:396078 10/39 (26%)
KELCH repeat 517..560 CDD:276965 10/39 (26%)
AT1G67480NP_176915.1 F-box_AtAFR-like 39..83 CDD:438923 14/53 (26%)
NanM 93..341 CDD:442289 63/265 (24%)
KELCH repeat 130..175 CDD:276965 15/44 (34%)
KELCH repeat 179..224 CDD:276965 16/45 (36%)
KELCH repeat 227..267 CDD:276965 11/51 (22%)
Blue background indicates that the domain is not in the aligned region.

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