DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT1G61540

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_176348.1 Gene:AT1G61540 / 842448 AraportID:AT1G61540 Length:402 Species:Arabidopsis thaliana


Alignment Length:249 Identity:57/249 - (22%)
Similarity:87/249 - (34%) Gaps:89/249 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 VAVLNGKLYAFGG--------FNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVG-VAALDDCIY 389
            |..:...:|..||        :..|...|:|.|.|.|.::|.|...|...|.... |..:|..||
plant   129 VIAVGSNIYKIGGTKSYRHKLWKRTRYSSSVSVLDCRSHRWRQAPGMRVARGCSSTVCEVDGKIY 193

  Fly   390 VCGG-YDGVTSLNTVEVYYPKSNTWKTVAQ-MMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVER 452
            :.|| .:.:.||..:||:.||:.||.|:.. .::|:                 ||          
plant   194 IAGGCKEDIGSLYWIEVFDPKTQTWGTLKNPCIEYQ-----------------HD---------- 231

  Fly   453 YDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWK--------- 508
                          :..||.:....|:||||:    .|:.|:    .|:.:.|.||         
plant   232 --------------IGYRCEVKSLGLDGKIYM----FGSEFV----VYNFEEDRWKCIGRDKYNL 274

  Fly   509 --LVTPM------NCKRSRVALAANMG-----------KLW-AIGGYDGESNLS 542
              .|.||      :|....|....:.|           .|| .:.|.:|..:||
plant   275 YHAVDPMSRINSSSCVVDNVLFILDKGTRVFKWYDFKVSLWKELNGVEGLPDLS 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 45/197 (23%)
KELCH repeat 329..372 CDD:276965 12/45 (27%)
KELCH repeat 376..417 CDD:276965 16/42 (38%)
KELCH repeat 423..466 CDD:276965 2/42 (5%)
KELCH repeat 470..514 CDD:276965 16/60 (27%)
Kelch_1 517..560 CDD:396078 8/38 (21%)
KELCH repeat 517..560 CDD:276965 8/38 (21%)
AT1G61540NP_176348.1 F-box_AtAFR-like 26..70 CDD:438923
NanM <123..268 CDD:442289 45/187 (24%)
KELCH repeat 125..175 CDD:276965 12/45 (27%)
KELCH repeat 179..222 CDD:276965 16/42 (38%)
Blue background indicates that the domain is not in the aligned region.

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