DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT1G60570

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_176257.1 Gene:AT1G60570 / 842352 AraportID:AT1G60570 Length:381 Species:Arabidopsis thaliana


Alignment Length:263 Identity:58/263 - (22%)
Similarity:97/263 - (36%) Gaps:96/263 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 MSMMRSRVGVAVLNGKLYAFGGFNG-TERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCI 388
            :|::..|....:.:|::|.|...:| ||                                  :|:
plant    45 LSLVCKRFHSLLTSGEIYRFRSLSGYTE----------------------------------NCL 75

  Fly   389 YVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAG-----------------GVTQLNGYVY 436
            |||..:.          :..:|:.|..:.:  |.:|:|                 .:..:...:|
plant    76 YVCLRFS----------HTGRSHRWFMLRE--KNKSSGYVLAPIPISHSPSLHASSIVAVGSKIY 128

  Fly   437 ALGG-HDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLRS--VE 498
            .:|| .||    .||...|.....|::...|...|.|.....::|||||.||....|:..|  :|
plant   129 KIGGVMDG----SSVSILDCWSHRWLEAPSMQMERDRPSANLIDGKIYVTGGCHRGSYNPSKWME 189

  Fly   499 CYDPQTDTWKLVTPMNCKRSRVALAA------NM---GKL---WAIGGYDGESNLSTVEVYDPET 551
            .:|.:|:||:   |:.|:..|:...:      |:   |||   ||..|.          ||:|:.
plant   190 VFDLKTETWE---PVLCRSDRLTFESYHERTNNLLVDGKLYIFWADKGV----------VYNPKD 241

  Fly   552 DKW 554
            |.|
plant   242 DTW 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 43/205 (21%)
KELCH repeat 329..372 CDD:276965 7/43 (16%)
KELCH repeat 376..417 CDD:276965 6/40 (15%)
KELCH repeat 423..466 CDD:276965 11/60 (18%)
KELCH repeat 470..514 CDD:276965 17/45 (38%)
Kelch_1 517..560 CDD:396078 13/50 (26%)
KELCH repeat 517..560 CDD:276965 13/50 (26%)
AT1G60570NP_176257.1 F-box_AtAFR-like 21..65 CDD:438923 4/19 (21%)
NanM 75..327 CDD:442289 49/199 (25%)
KELCH repeat 116..155 CDD:276965 9/42 (21%)
KELCH repeat 159..214 CDD:276965 19/57 (33%)
Blue background indicates that the domain is not in the aligned region.

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