DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT1G27420

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_174062.1 Gene:AT1G27420 / 839632 AraportID:AT1G27420 Length:346 Species:Arabidopsis thaliana


Alignment Length:391 Identity:97/391 - (24%)
Similarity:140/391 - (35%) Gaps:146/391 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 EVIFEACMKWVKYAEDKRSELFPQVLAAVR-LPLLSPQFLADRVAREELIRSSHQCRDLLDEAKD 265
            ::..:.|.:|       ||.|..|..|||| |.....:||.       ::..|...||:..|..|
plant    32 QITSQVCRRW-------RSFLRSQHFAAVRKLTGTVEEFLC-------VLMESECGRDVYWEVFD 82

  Fly   266 FHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRS 330
                              .||... |||..|.|               ||.:.:           
plant    83 ------------------ASGNKL-GQIPPVPG---------------PLKRGF----------- 102

  Fly   331 RVGVAVLN-GKLYAFGGF--------NGTERLSTVEVY--DPRKNKWSQGCAMLCKRSAVGVAAL 384
              |||||: ||:..|||:        |.|...::.:||  ||..|.|.:...|...|.....|.:
plant   103 --GVAVLDGGKIVFFGGYTEVEGSGINSTTVSASADVYEFDPANNSWRKLAGMNIPRYNFAFAEV 165

  Fly   385 DDCIYVCGGYDGVT-SLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFD 448
            :..:||..||...| ||:..|||.||:|.|                               |:..
plant   166 NGLLYVIRGYSTDTYSLSNAEVYNPKTNQW-------------------------------SLMH 199

  Fly   449 SVERYDQAEDVWVKMSPMLNRRCRLGVA-TLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTP 512
            ...|     .||            .|.| ..:.|:|..|.  |:.|   ::.|||:|.||:   .
plant   200 CPNR-----PVW------------RGFAFAFSSKLYAVGN--GSRF---IDIYDPKTQTWE---E 239

  Fly   513 MNCKRSRVALAANM--GKLWAIGGYDGESNL-STVEVYDPETDKWT--FMPPMCAHSGG--VGAG 570
            :|.::|....:..:  .|:     |..:.|: ..:.|:|||.:.|:  |:||   ..||  |..|
plant   240 LNSEQSVSVYSYTVVRNKV-----YFMDRNMPGRLGVFDPEENSWSSVFVPP---REGGFWVRLG 296

  Fly   571 V 571
            |
plant   297 V 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 79/321 (25%)
KELCH repeat 329..372 CDD:276965 18/53 (34%)
KELCH repeat 376..417 CDD:276965 16/41 (39%)
KELCH repeat 423..466 CDD:276965 4/42 (10%)
KELCH repeat 470..514 CDD:276965 13/44 (30%)
Kelch_1 517..560 CDD:396078 11/47 (23%)
KELCH repeat 517..560 CDD:276965 11/47 (23%)
AT1G27420NP_174062.1 F-box_AtAFR-like 10..54 CDD:438923 8/28 (29%)
NanM 78..306 CDD:442289 81/331 (24%)
KELCH repeat 100..153 CDD:276965 18/65 (28%)
KELCH repeat 157..202 CDD:276965 17/75 (23%)
KELCH repeat 205..242 CDD:276965 15/56 (27%)
Blue background indicates that the domain is not in the aligned region.

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