DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT1G26930

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_174015.2 Gene:AT1G26930 / 839583 AraportID:AT1G26930 Length:421 Species:Arabidopsis thaliana


Alignment Length:194 Identity:51/194 - (26%)
Similarity:77/194 - (39%) Gaps:37/194 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 LNTVEVYYPKSNTWKTVAQM-----MKYRSAGGVT----------QLNGYVYALGGHDGLSIFDS 449
            ||..|.:.|:|..|..:..|     .:|.....:.          :::.||              
plant   131 LNEWEAFDPRSKRWMHLPSMPQNECFRYADKESLAVGTDLLVFGWEVSSYV-------------- 181

  Fly   450 VERYDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNS--FLRSVECYDPQTDTWKLVTP 512
            :.||....:.|.....|...||..|.|:. |:|.|..|.|.:|  .|.:.|.|:.:..||.::..
plant   182 IYRYSLLTNSWSTAKSMNMPRCLFGSASY-GEIAVLAGGCDSSGRILDTAELYNYEDQTWLVLPG 245

  Fly   513 MNCKRSRVALAANMGKLWAIGGYD-GESN----LSTVEVYDPETDKWTFMPPMCAHSGGVGAGV 571
            ||.:|...:.....||.:.|||.. ||.|    |:..|.:|.:|.|||.:|.|.......|.|:
plant   246 MNKRRKMCSGVFMDGKFYVIGGIGVGEENEPKVLTCGEEFDLKTRKWTEIPEMSPPRSNQGNGM 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 29/126 (23%)
KELCH repeat 329..372 CDD:276965
KELCH repeat 376..417 CDD:276965 6/16 (38%)
KELCH repeat 423..466 CDD:276965 5/52 (10%)
KELCH repeat 470..514 CDD:276965 15/45 (33%)
Kelch_1 517..560 CDD:396078 17/47 (36%)
KELCH repeat 517..560 CDD:276965 17/47 (36%)
AT1G26930NP_174015.2 F-box_SF 71..115 CDD:459239
NanM 131..383 CDD:442289 51/194 (26%)
KELCH repeat 202..247 CDD:276965 15/45 (33%)
KELCH repeat 250..298 CDD:276965 17/47 (36%)
KELCH repeat 302..354 CDD:276965 2/8 (25%)
Blue background indicates that the domain is not in the aligned region.

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