DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT1G19460

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_173378.1 Gene:AT1G19460 / 838530 AraportID:AT1G19460 Length:416 Species:Arabidopsis thaliana


Alignment Length:265 Identity:60/265 - (22%)
Similarity:95/265 - (35%) Gaps:85/265 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 SHQCRDLLDEAKDFHLMPE-RRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLT 316
            :|:||.|          |: :||     |....:| .|.|:||.:||..........:|::|...
plant   179 THKCRSL----------PKMKRG-----RYHAAAG-VFDGKIYVIGGFRMRKPDAEWIEVFDLKK 227

  Fly   317 KKWKM----GEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRK-------------- 363
            :.|:.    ..:.||.......||:..|||..|        |...:|:|::              
plant   228 QIWESLPGPYPKTSMDSQFFAHAVMEDKLYILG--------SRCLIYEPKRNGEWDATVNANPIW 284

  Fly   364 NKWSQGCAMLCKRSAVGVAALDDCIYV----CGGYDGVTSLNTVEVYYPKSNTWKTV-------- 416
            |.|...|.|.|        .:||.:|.    |      |..:.:.||.||..||:.|        
plant   285 NLWKVPCTMQC--------VIDDMLYTIDPQC------TLGHPIVVYNPKDKTWRPVKGESLRTL 335

  Fly   417 --------AQMMKYRSAGGVTQLNGYVYALG---GHDGL-SIFDSVERYDQAEDVWVKMSPMLNR 469
                    ::|..:.....:...||..|..|   |..|: .:...:|:.:..| :|.|:..:   
plant   336 PSYFVSDGSEMANFGGKLVILGSNGSCYDTGDCIGEKGIWCVMIELEKREGGE-IWGKVESL--- 396

  Fly   470 RCRLG 474
            .|.||
plant   397 DCVLG 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 60/265 (23%)
KELCH repeat 329..372 CDD:276965 12/56 (21%)
KELCH repeat 376..417 CDD:276965 12/60 (20%)
KELCH repeat 423..466 CDD:276965 10/46 (22%)
KELCH repeat 470..514 CDD:276965 3/5 (60%)
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT1G19460NP_173378.1 F-box_SF 57..98 CDD:459239
NanM 136..357 CDD:442289 47/215 (22%)
KELCH repeat 146..188 CDD:276965 5/18 (28%)
KELCH repeat 192..243 CDD:276965 12/51 (24%)
Blue background indicates that the domain is not in the aligned region.

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