DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT1G16250

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001321591.1 Gene:AT1G16250 / 838194 AraportID:AT1G16250 Length:383 Species:Arabidopsis thaliana


Alignment Length:365 Identity:86/365 - (23%)
Similarity:133/365 - (36%) Gaps:94/365 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 RSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGES-------VST 308
            ||.:|......||..:|.:|..|.:...:.....:....:..:..:||..:...|       |.|
plant    68 RSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVSSFPHQKPVVT 132

  Fly   309 VEI--YDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTER--LSTVEVYDPRKNKWSQG 369
            .::  :||..|:|||...|...|:......::||:|..||.|.|..  :.:.|||||..::|.:.
plant   133 KDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAEVYDPVADRWEEL 197

  Fly   370 CAMLCKRSAVGVAALD--DCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLN 432
            .||  .|..:..:.|.  .|.:|.....|....|:.||:.|:..||.||                
plant   198 PAM--PRPQMDCSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTWSTV---------------- 244

  Fly   433 GYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATL-NGKIYVCGGYCGNSFLRS 496
                                    ||||     ..:|..:..|..: |.::|....: |.|.:::
plant   245 ------------------------EDVW-----PFSRAMQFAVQVMKNDRVYTIVDW-GESLIKT 279

  Fly   497 VECYDPQTDTW-------KLVTPMNCKRSRVA----LAANMGKLWAIGG------------YDGE 538
               .|.....|       .:|.| |..|...|    .||...:|:.|||            :| .
plant   280 ---RDTDEGEWYNVGSVPSVVLP-NHPRELEAFGYGFAALRNELYVIGGKVLKWEESGAGRFD-I 339

  Fly   539 SNLSTVEVYDPETDK---WTFMPPMCAHSGGVGAGVIRIE 575
            ..|..|.|.:| .|:   |....|||..:||...|.:.:|
plant   340 VRLPVVRVCNP-LDRPLNWRETKPMCIPAGGSIIGCVSLE 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045
PHA03098 36..510 CDD:222983 61/279 (22%)
BACK 143..245 CDD:285009
Kelch 292..339 CDD:128874 13/55 (24%)
KELCH repeat 329..372 CDD:276965 14/44 (32%)
Kelch 340..386 CDD:128874 16/49 (33%)
KELCH repeat 376..417 CDD:276965 12/42 (29%)
Kelch 387..433 CDD:128874 11/45 (24%)
KELCH repeat 423..466 CDD:276965 4/42 (10%)
Kelch 435..480 CDD:128874 6/45 (13%)
Kelch_1 469..514 CDD:279660 10/52 (19%)
KELCH repeat 470..514 CDD:276965 9/51 (18%)
Kelch_1 517..560 CDD:279660 15/61 (25%)
KELCH repeat 517..560 CDD:276965 15/61 (25%)
AT1G16250NP_001321591.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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