DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and AT1G15670

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_563979.1 Gene:AT1G15670 / 838136 AraportID:AT1G15670 Length:359 Species:Arabidopsis thaliana


Alignment Length:346 Identity:84/346 - (24%)
Similarity:123/346 - (35%) Gaps:108/346 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 LADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQS-------FRTRQRSGE------FFTG 291
            |.:.||.|.|:|||:         |.|.||.....|.|.       ||.|:.||.      ....
plant     7 LPETVAYECLLRSSY---------KQFPLMASVCKLWQREISLSDFFRHRKASGHSQELVVLSQA 62

  Fly   292 QIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTV 356
            ::..|..|.|..:::.| .:|                  |:.|..|           ||...|.:
plant    63 RVDPVKELVSGNKTIPT-PVY------------------RISVLEL-----------GTGLRSEL 97

  Fly   357 EVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVT--SLNTVEVYYPKSNTWKTVAQM 419
                |.....|.|..:.|:..:||    .|.:.:| |.|.||  :.::|.|:...::||:....|
plant    98 ----PPVPGHSNGLPLFCRLVSVG----SDLVVLC-GLDPVTWRTSDSVFVFSFLTSTWRVGKSM 153

  Fly   420 ----MKYRSAGGVTQLNGYVYALGGHD-GLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLN 479
                ..:.:....:|.|  |:..|||| ..:...|...||.|||.|..:..|...|.........
plant   154 PGGPRSFFACASDSQRN--VFVAGGHDEDKNAMMSALVYDVAEDRWAFLPDMGRERDECTAIFHA 216

  Fly   480 GKIYVCGGYC---GNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWAIGGYDGESNL 541
            ||.:|.|||.   ...|.::.|.:|  ..||:                     |:   ..||..|
plant   217 GKFHVIGGYSTEEQGQFSKTAESFD--VTTWR---------------------WS---PQGEEFL 255

  Fly   542 STVEVYDPETDKWTFMPPMCA 562
            |:         :.|..||:||
plant   256 SS---------EMTMWPPICA 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 74/292 (25%)
KELCH repeat 329..372 CDD:276965 9/42 (21%)
KELCH repeat 376..417 CDD:276965 12/42 (29%)
KELCH repeat 423..466 CDD:276965 14/43 (33%)
KELCH repeat 470..514 CDD:276965 12/46 (26%)
Kelch_1 517..560 CDD:396078 7/42 (17%)
KELCH repeat 517..560 CDD:276965 7/42 (17%)
AT1G15670NP_563979.1 F-box_SF 3..47 CDD:459239 16/48 (33%)
KELCH repeat 110..153 CDD:276965 13/47 (28%)
NanM 114..>277 CDD:442289 50/196 (26%)
KELCH repeat 158..204 CDD:276965 14/47 (30%)
KELCH repeat 207..249 CDD:276965 13/67 (19%)
KELCH repeat 265..297 CDD:276965 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.