DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT5G51250

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_199938.1 Gene:AT5G51250 / 835199 AraportID:AT5G51250 Length:368 Species:Arabidopsis thaliana


Alignment Length:254 Identity:57/254 - (22%)
Similarity:90/254 - (35%) Gaps:66/254 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 IYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGF---NGTER-- 352
            ||.:||....|.|.|:|.|.|..:..|:....:.:.......:||:.|:|..|.:   ||...  
plant   117 IYNIGGSIYLGPSSSSVSILDSQSHMWREAPSLRVELMSHSASVLDRKIYVAGSYKDGNGDSNSC 181

  Fly   353 LSTVEVYDPRKNKW-------SQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVE--VYYP 408
            .:..||:|.:...|       |:...:...:||        ||      ||...:.|..  ||..
plant   182 KNLFEVFDTKTQVWHPEPIPCSKTKGIFYSKSA--------CI------DGKFHVETTHGVVYAY 232

  Fly   409 KSNTW-KTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMS-----PML 467
            |...| |.:..|...|::....::|..::.:  |.|:     ...||....:|..:.     |.|
plant   233 KEGRWDKAIPTMFGMRASYSFCEINNVLFYI--HRGV-----FRWYDTKLRMWRILKGLLGLPSL 290

  Fly   468 NRRCRLGVATLNGKIYV--------CGG--------YC---------GNSFLRSVECYD 501
            .....:.:|...||:.|        ||.        :|         ..||...||.:|
plant   291 PENMFVRLADYGGKMAVLWEEDRPSCGAGGRDEMMIWCAVIALKRHLNFSFWGKVEWFD 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 57/254 (22%)
KELCH repeat 329..372 CDD:276965 12/54 (22%)
KELCH repeat 376..417 CDD:276965 12/43 (28%)
KELCH repeat 423..466 CDD:276965 7/47 (15%)
KELCH repeat 470..514 CDD:276965 12/57 (21%)
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT5G51250NP_199938.1 F-box_AtAFR-like 1..44 CDD:438923
KELCH repeat 109..149 CDD:276965 11/31 (35%)
NanM 143..>284 CDD:442289 33/161 (20%)
KELCH repeat 153..199 CDD:276965 11/45 (24%)
KELCH repeat 202..244 CDD:276965 13/55 (24%)
Blue background indicates that the domain is not in the aligned region.

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