DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT5G51250

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_199938.1 Gene:AT5G51250 / 835199 AraportID:AT5G51250 Length:368 Species:Arabidopsis thaliana


Alignment Length:254 Identity:57/254 - (22%)
Similarity:90/254 - (35%) Gaps:66/254 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 IYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGF---NGTER-- 352
            ||.:||....|.|.|:|.|.|..:..|:....:.:.......:||:.|:|..|.:   ||...  
plant   117 IYNIGGSIYLGPSSSSVSILDSQSHMWREAPSLRVELMSHSASVLDRKIYVAGSYKDGNGDSNSC 181

  Fly   353 LSTVEVYDPRKNKW-------SQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVE--VYYP 408
            .:..||:|.:...|       |:...:...:||        ||      ||...:.|..  ||..
plant   182 KNLFEVFDTKTQVWHPEPIPCSKTKGIFYSKSA--------CI------DGKFHVETTHGVVYAY 232

  Fly   409 KSNTW-KTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMS-----PML 467
            |...| |.:..|...|::....::|..::.:  |.|:     ...||....:|..:.     |.|
plant   233 KEGRWDKAIPTMFGMRASYSFCEINNVLFYI--HRGV-----FRWYDTKLRMWRILKGLLGLPSL 290

  Fly   468 NRRCRLGVATLNGKIYV--------CGG--------YC---------GNSFLRSVECYD 501
            .....:.:|...||:.|        ||.        :|         ..||...||.:|
plant   291 PENMFVRLADYGGKMAVLWEEDRPSCGAGGRDEMMIWCAVIALKRHLNFSFWGKVEWFD 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045
PHA03098 36..510 CDD:222983 57/254 (22%)
BACK 143..245 CDD:285009
Kelch 292..339 CDD:128874 13/45 (29%)
KELCH repeat 329..372 CDD:276965 12/54 (22%)
Kelch 340..386 CDD:128874 12/57 (21%)
KELCH repeat 376..417 CDD:276965 12/43 (28%)
Kelch 387..433 CDD:128874 12/48 (25%)
KELCH repeat 423..466 CDD:276965 7/47 (15%)
Kelch 435..480 CDD:128874 8/49 (16%)
Kelch_1 469..514 CDD:279660 12/58 (21%)
KELCH repeat 470..514 CDD:276965 12/57 (21%)
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
AT5G51250NP_199938.1 F-box 1..46 CDD:279040
KELCH repeat 109..149 CDD:276965 11/31 (35%)
Kelch_2 153..201 CDD:284956 11/47 (23%)
KELCH repeat 153..199 CDD:276965 11/45 (24%)
KELCH repeat 202..244 CDD:276965 13/55 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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