DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and NSP5

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_568692.1 Gene:NSP5 / 834871 AraportID:AT5G48180 Length:326 Species:Arabidopsis thaliana


Alignment Length:279 Identity:77/279 - (27%)
Similarity:116/279 - (41%) Gaps:51/279 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 PLTKKW-KMGEQMS--MMRSRVGVAVLNGKLYAFGGFNGTERLSTVE------VYDPRKNKWSQG 369
            |:..|| |:|::.:  ..||...:.|:..|:|.|||    |...|:.      |:|....:||..
plant     3 PVENKWLKVGQKGAGPGARSSHAMTVVGNKVYCFGG----ELKPTIHIDNDLYVFDLETQEWSIA 63

  Fly   370 CA-----MLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQM------MKYR 423
            .|     ..|  ..|.:..:...|||.||.|.....|.:..|..::|.||.:|.:      ..|.
plant    64 PATGEAPFPC--FGVSMVTIGSTIYVYGGRDDKRRYNGLHSYDTETNEWKLLAPVEEGLPGRSYH 126

  Fly   424 SAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCR----LGVATLNGKIYV 484
            |..|..:   .||..||.......:::..||..:..||:. |.....|:    .|:..:.|:|:|
plant   127 SMAGDDR---KVYVFGGVTAKGRVNTLHAYDVVDQKWVEY-PAAGEACKGRGAPGLVVVEGRIWV 187

  Fly   485 CGGYCGNSFLRSVECYDPQTDTWKLV-TPMNCKRSR-VALAANMGKLWAIGGYDGE--------- 538
            ..|:.||. |..:.|:|..::.||.| |..:...:| |..|.:.||...|  |.||         
plant   188 LFGFDGNE-LGDIHCFDLASEQWKAVETTGDVPAARSVFPAVSYGKYIVI--YGGEEEPHELMHM 249

  Fly   539 -SNLSTVEVY--DPETDKW 554
             :...:.|||  |.||..|
plant   250 GAGKMSGEVYQLDTETLVW 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 59/219 (27%)
KELCH repeat 329..372 CDD:276965 15/53 (28%)
KELCH repeat 376..417 CDD:276965 12/40 (30%)
KELCH repeat 423..466 CDD:276965 10/42 (24%)
KELCH repeat 470..514 CDD:276965 15/48 (31%)
Kelch_1 517..560 CDD:396078 16/51 (31%)
KELCH repeat 517..560 CDD:276965 16/51 (31%)
NSP5NP_568692.1 PLN02193 <3..319 CDD:177844 77/279 (28%)
KELCH repeat 21..69 CDD:276965 15/51 (29%)
KELCH repeat 73..121 CDD:276965 14/49 (29%)
KELCH repeat 123..162 CDD:276965 10/41 (24%)
KELCH repeat 173..219 CDD:276965 14/46 (30%)
KELCH repeat 222..271 CDD:276965 16/49 (33%)
Blue background indicates that the domain is not in the aligned region.

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