DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT5G35950

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_198444.1 Gene:AT5G35950 / 833586 AraportID:AT5G35950 Length:444 Species:Arabidopsis thaliana


Alignment Length:352 Identity:75/352 - (21%)
Similarity:113/352 - (32%) Gaps:118/352 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 RSGEFFTGQIYAVGGLASTGESVSTVEI--------------YDPLTK-----KWKMGEQMSMMR 329
            :.|:..||.|:.|.|...|    .|.||              ||..|.     ::|..:|.|.|.
plant    46 KDGKTITGPIHGVSGRGLT----QTFEINHLQKEYLLSIEGYYDISTGVIQSIQFKTNQQTSDMM 106

  Fly   330 -----SRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIY 389
                 ::..:..:.|::..|.|| ..:.|.::..|..|         :...:||:.........|
plant   107 GFNEGTKFSLRSMRGRIIGFHGF-ADKNLYSLRAYYIR---------IPATKSAMDGGQNTGRGY 161

  Fly   390 VCGG-YDGV---------TSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYA--LGGHD 442
            ..|| ||||         ||:..:.|.|.|                  |.|:..|.|.  :|..:
plant   162 DHGGDYDGVRKVYVTFDGTSIRNMRVDYDK------------------VGQVECYEYGVKIGTQN 208

  Fly   443 GLSIFDSVERYDQAEDVWVKMSPMLNRRC----RLGVATLNGKIYVCGGYCGNSFL--------- 494
            ..:|....|........:....|.   ||    .|...|.||:..|.|...|.:||         
plant   209 QFTINYPYECITSVGGSYADTQPY---RCIVLRSLTFKTSNGRTSVFGKETGTTFLLESQGNAIV 270

  Fly   495 ----RSVEC-------------YDPQT-----------DTWKLVTPMNCKRSRVALAANMGKLWA 531
                |...|             |.|.|           |:|.....:|.|:    :....|:...
plant   271 GFHGRVGSCVDSIGEYYAPFSPYPPPTEKLEGQGGDGGDSWDDGAFLNVKK----VCIGQGQFGI 331

  Fly   532 IG-GYDGESNLSTVEVYDPETDKWTFM 557
            :. .::.|::.|.|.|.| |..|.|.:
plant   332 VSVKFEYENDASEVVVGD-EHGKATLL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 64/302 (21%)
KELCH repeat 329..372 CDD:276965 7/47 (15%)
KELCH repeat 376..417 CDD:276965 14/50 (28%)
KELCH repeat 423..466 CDD:276965 7/44 (16%)
KELCH repeat 470..514 CDD:276965 18/84 (21%)
Kelch_1 517..560 CDD:396078 9/42 (21%)
KELCH repeat 517..560 CDD:276965 9/42 (21%)
AT5G35950NP_198444.1 Jacalin 13..141 CDD:396138 22/99 (22%)
Jacalin 158..289 CDD:396138 33/151 (22%)
Jacalin 318..441 CDD:396138 11/45 (24%)
Blue background indicates that the domain is not in the aligned region.

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