DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT5G28180

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_198170.1 Gene:AT5G28180 / 832894 AraportID:AT5G28180 Length:352 Species:Arabidopsis thaliana


Alignment Length:388 Identity:79/388 - (20%)
Similarity:145/388 - (37%) Gaps:115/388 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 FLISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQS-EEFLALDCEQLLELMRRDEL 196
            |::|..:       :||:........:...|:.:....|::|:| ...|:|.|:....|:..:||
plant    19 FVVSLLY-------KTFSRKEKKLTFLSLPDEIVLNCLARISRSYYPKLSLVCKTFRTLLISNEL 76

  Fly   197 NV-----RTEEVIFEACMK------------WVKYAED-----KRSELFPQVLAAVRLP----LL 235
            .|     :|.|..|..|:|            |:|..:.     :::|........|::|    .:
plant    77 TVARVQLKTYESFFHVCLKFPDKPNPSMFTLWIKPGQILTNQLEKNERSTGATRLVQIPSSYCSI 141

  Fly   236 SPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLL------QSFRTRQRSGEFFTGQIY 294
            .|.:|.. |..|....|.|.     |.:.:. .:..:..|.      .:....:..|..:.|::|
plant   142 VPHYLIS-VGSEVYGLSQHN-----DPSSNM-FVRNKEDLFWCNAPNMTVARAKAIGHAYNGKLY 199

  Fly   295 AVGGLASTGESVSTVEIYDPLTKKWKM----GEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLST 355
            .:|| ....|||:..|::||.|:.|:.    |.::.....| .:.|...|||.    :..|::.:
plant   200 VMGG-CRDDESVNWGEVFDPKTQTWEALPDPGSELRFSSIR-KIDVFQEKLYV----SSNEKIDS 258

  Fly   356 VEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYV-CGGYDGVTSLNTVEVYYPKSNTWKTVAQM 419
              ||||::.||:     :.::|.|      .|:.: ||                          |
plant   259 --VYDPKEGKWN-----VAEKSPV------QCMNLGCG--------------------------M 284

  Fly   420 MKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKI 482
            ::..:.||..              |.::|.| ...|.:|:|..:..:..|.   ||..:.|||
plant   285 IEIANYGGKL--------------LILWDKV-GLSQDKDIWCAVIALEKRD---GVDEVWGKI 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 1/3 (33%)
PHA03098 36..510 CDD:222983 79/388 (20%)
KELCH repeat 329..372 CDD:276965 12/42 (29%)
KELCH repeat 376..417 CDD:276965 5/41 (12%)
KELCH repeat 423..466 CDD:276965 8/42 (19%)
KELCH repeat 470..514 CDD:276965 5/13 (38%)
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT5G28180NP_198170.1 F-box_AtAFR-like 37..76 CDD:438923 8/38 (21%)
NanM 176..>297 CDD:442289 35/179 (20%)
KELCH repeat 186..231 CDD:276965 13/45 (29%)
Blue background indicates that the domain is not in the aligned region.

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