DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT5G28180

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_198170.1 Gene:AT5G28180 / 832894 AraportID:AT5G28180 Length:352 Species:Arabidopsis thaliana


Alignment Length:388 Identity:79/388 - (20%)
Similarity:145/388 - (37%) Gaps:115/388 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 FLISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQS-EEFLALDCEQLLELMRRDEL 196
            |::|..:       :||:........:...|:.:....|::|:| ...|:|.|:....|:..:||
plant    19 FVVSLLY-------KTFSRKEKKLTFLSLPDEIVLNCLARISRSYYPKLSLVCKTFRTLLISNEL 76

  Fly   197 NV-----RTEEVIFEACMK------------WVKYAED-----KRSELFPQVLAAVRLP----LL 235
            .|     :|.|..|..|:|            |:|..:.     :::|........|::|    .:
plant    77 TVARVQLKTYESFFHVCLKFPDKPNPSMFTLWIKPGQILTNQLEKNERSTGATRLVQIPSSYCSI 141

  Fly   236 SPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLL------QSFRTRQRSGEFFTGQIY 294
            .|.:|.. |..|....|.|.     |.:.:. .:..:..|.      .:....:..|..:.|::|
plant   142 VPHYLIS-VGSEVYGLSQHN-----DPSSNM-FVRNKEDLFWCNAPNMTVARAKAIGHAYNGKLY 199

  Fly   295 AVGGLASTGESVSTVEIYDPLTKKWKM----GEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLST 355
            .:|| ....|||:..|::||.|:.|:.    |.::.....| .:.|...|||.    :..|::.:
plant   200 VMGG-CRDDESVNWGEVFDPKTQTWEALPDPGSELRFSSIR-KIDVFQEKLYV----SSNEKIDS 258

  Fly   356 VEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYV-CGGYDGVTSLNTVEVYYPKSNTWKTVAQM 419
              ||||::.||:     :.::|.|      .|:.: ||                          |
plant   259 --VYDPKEGKWN-----VAEKSPV------QCMNLGCG--------------------------M 284

  Fly   420 MKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKI 482
            ::..:.||..              |.::|.| ...|.:|:|..:..:..|.   ||..:.|||
plant   285 IEIANYGGKL--------------LILWDKV-GLSQDKDIWCAVIALEKRD---GVDEVWGKI 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 1/1 (100%)
PHA03098 36..510 CDD:222983 79/388 (20%)
BACK 143..245 CDD:285009 25/128 (20%)
Kelch 292..339 CDD:128874 14/50 (28%)
KELCH repeat 329..372 CDD:276965 12/42 (29%)
Kelch 340..386 CDD:128874 12/45 (27%)
KELCH repeat 376..417 CDD:276965 5/41 (12%)
Kelch 387..433 CDD:128874 6/46 (13%)
KELCH repeat 423..466 CDD:276965 8/42 (19%)
Kelch 435..480 CDD:128874 9/44 (20%)
Kelch_1 469..514 CDD:279660 6/14 (43%)
KELCH repeat 470..514 CDD:276965 5/13 (38%)
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
AT5G28180NP_198170.1 F-box 36..78 CDD:279040 10/41 (24%)
KELCH repeat 186..231 CDD:276965 13/45 (29%)
Kelch_1 192..230 CDD:279660 12/38 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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