DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT5G03020

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_195922.1 Gene:AT5G03020 / 831706 AraportID:AT5G03020 Length:347 Species:Arabidopsis thaliana


Alignment Length:230 Identity:51/230 - (22%)
Similarity:91/230 - (39%) Gaps:71/230 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 QIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNG---TERL 353
            |||.:||......| :.|.|:|..|.:|:...:|...|.....:|::||:|..|||.|   |:..
plant   119 QIYIIGGFVRRRRS-NRVSIFDYRTYQWRRLPKMRQPRVYPAASVIDGKIYVIGGFRGSMPTDIE 182

  Fly   354 STVEVYDPRKNKW-----------------------SQGCAMLCKRSAVGVAALDDCIYVCGGYD 395
            ::.|||||:.|.|                       ::.|.::.|.|.:        :||..|  
plant   183 NSGEVYDPKTNTWEPILLTSLDLTVQNVFKKKHYFTTKACLVINKVSCL--------LYVSDG-- 237

  Fly   396 GVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYAL----GGHDGLSI---------- 446
                    ::|      |:...:..:.|...|:.:.:..::.:    ||...:::          
plant   238 --------KLY------WREDKEGFECRKVYGLAEQSSNLFRVVANSGGGGRVTVWWKSMTKGCE 288

  Fly   447 FDSVERYDQAEDVW-VKMSPMLNRRCRLGVATLNG 480
            ||.:...:....:| .::|  |.||   |:..|.|
plant   289 FDCLLTEECETKIWCAEIS--LERR---GLRELRG 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 51/230 (22%)
KELCH repeat 329..372 CDD:276965 18/68 (26%)
KELCH repeat 376..417 CDD:276965 6/40 (15%)
KELCH repeat 423..466 CDD:276965 8/57 (14%)
KELCH repeat 470..514 CDD:276965 4/11 (36%)
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT5G03020NP_195922.1 F-box_AtAFR-like 22..60 CDD:438923
NanM 105..>198 CDD:442289 29/79 (37%)
KELCH repeat 110..151 CDD:276965 11/32 (34%)
KELCH repeat 155..198 CDD:276965 17/42 (40%)
Blue background indicates that the domain is not in the aligned region.

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