DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G39760

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_195686.1 Gene:AT4G39760 / 830134 AraportID:AT4G39760 Length:369 Species:Arabidopsis thaliana


Alignment Length:152 Identity:36/152 - (23%)
Similarity:60/152 - (39%) Gaps:42/152 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 VLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDC-------IYVCGG 393
            ::..:.|..||::  :.||: .|:..:..|    ...|.|..::.||.:|..       |||.||
plant   127 IVGSETYIVGGYD--DALSS-SVWFYKNGK----IHTLSKSPSMSVARIDAVVVGQYPNIYVMGG 184

  Fly   394 YDGVTSLNTVEVYYPKSNTWKTV--------AQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSV 450
            .|...|:|..||:..|:.||:.:        .|:::...   :.:.|.||             |.
plant   185 CDSDESMNWGEVFNIKTQTWEPLPDPGPEVRGQLVRKMK---MQKKNVYV-------------SS 233

  Fly   451 ER----YDQAEDVWVKMSPMLN 468
            |:    ||..|..|.....:.|
plant   234 EKKDYIYDTEERTWKVTEAVFN 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 36/152 (24%)
KELCH repeat 329..372 CDD:276965 7/35 (20%)
KELCH repeat 376..417 CDD:276965 16/55 (29%)
KELCH repeat 423..466 CDD:276965 9/46 (20%)
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT4G39760NP_195686.1 F-box_AtAFR-like 16..60 CDD:438923
NanM <125..>212 CDD:442289 25/91 (27%)
KELCH repeat 167..212 CDD:276965 14/44 (32%)
Blue background indicates that the domain is not in the aligned region.

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