DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G39756

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_568071.1 Gene:AT4G39756 / 830133 AraportID:AT4G39756 Length:374 Species:Arabidopsis thaliana


Alignment Length:373 Identity:87/373 - (23%)
Similarity:139/373 - (37%) Gaps:83/373 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 CRQLIDAADKYIDQNFAKVSQS-EEFLALDCEQLLELMRRDELNVR-----TEEVIFEACMKWVK 213
            |...:...::.:....|::.:| ...|:|.|:....|:...||.|.     |.|.:...|::   
plant    17 CPSFLSLPEEILVNCLARIPKSYYPKLSLVCKSFCSLILSMELYVERLYLGTHEDVLHVCLQ--- 78

  Fly   214 YAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQS 278
             ..|:|   .|...:....|        |:....::.:.....|:.|       |:|    :..|
plant    79 -LPDRR---LPSWFSLWTKP--------DQTLTNDIGKKKKSTRNTL-------LVP----IPSS 120

  Fly   279 FRTRQRSGEFFTGQI----YAVGGLASTGESVSTV----EIYDPLTKKWKMGEQMSMMRSRVGVA 335
            :..|.   ..|.|:|    ||: ...:|..||..|    .||     .|:....|::.|:.|...
plant   121 YSPRV---PMFIGEIGSELYAI-SKHNTPSSVMWVRDKTSIY-----AWRKAPSMTVARANVFAY 176

  Fly   336 VLNGKLYAFGGFNGTERLSTVEVYDPRKNKW---SQGCAMLCKRSAVGVAALDDCIYVCGGYDGV 397
            |:|||:|..||....|.....||:||:...|   :...|.|...|.:|:|..:..|||...|   
plant   177 VINGKIYVMGGCAADESKYWAEVFDPKTQTWKPLTDPGAELRVSSIIGMAVSEGKIYVKNSY--- 238

  Fly   398 TSLNTVE--VYYPKSNTWKTVAQ--MMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAED 458
                 |:  ||.|:.:.|..||.  |::.:     .::...:|....       .|...||....
plant   239 -----VKDYVYDPEEDKWDVVASSFMIERK-----CEIENVLYRFSR-------QSCSWYDTKHK 286

  Fly   459 VW--VKMSPMLNRRCR---LGVATLNGKIYVCGGYCGNSFL--RSVEC 499
            .|  :|....||||.|   |.||....|:.:........|.  :|:.|
plant   287 EWRDIKGLATLNRRRRSSILEVAKYGDKVLILWEIFAKPFYQNKSIWC 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 87/373 (23%)
KELCH repeat 329..372 CDD:276965 15/45 (33%)
KELCH repeat 376..417 CDD:276965 12/42 (29%)
KELCH repeat 423..466 CDD:276965 6/44 (14%)
KELCH repeat 470..514 CDD:276965 9/35 (26%)
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT4G39756NP_568071.1 F-box_AtAFR-like 19..63 CDD:438923 9/43 (21%)
NanM 159..>256 CDD:442289 32/104 (31%)
KELCH repeat 170..215 CDD:276965 15/44 (34%)
KELCH repeat 218..256 CDD:276965 13/45 (29%)
Blue background indicates that the domain is not in the aligned region.

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