DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G39753

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_568070.1 Gene:AT4G39753 / 830132 AraportID:AT4G39753 Length:390 Species:Arabidopsis thaliana


Alignment Length:472 Identity:97/472 - (20%)
Similarity:147/472 - (31%) Gaps:188/472 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 CASFLISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRD 194
            |.|.:...::|...:..:||.|.:|.          ||.|.|:                      
plant    46 CLSRIPKSYYPKLSIVSKTFRDLIIS----------IDLNHAR---------------------- 78

  Fly   195 ELNVRTEEVIFEACMK------------WVKYA--EDKRSE-------LFPQVLA--AVRLPLLS 236
             .:.:|:|..|..|:|            |:|..  :||..|       ...||.:  |.:.|||.
plant    79 -FHHKTQEHFFHVCLKLPDRPLPSWYTLWIKPQGFDDKEEEKKKKKKSTLVQVPSSYASQTPLLV 142

  Fly   237 PQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQRSGE---FFTGQIYAVGG 298
            ....:|..|.::....|........|...:...|:        .|..|:..   .|..:||.:||
plant   143 VGIDSDVYAFKQCYPPSRVMFVRNKECVIWRNAPD--------MTVARANPVAYVFDRKIYVMGG 199

  Fly   299 LASTGESVSTVEIYDPLTKKWKMGEQM----------SMMRSRVGVAVLNGKLYAFGGFNGTERL 353
            .|.| ||.:..|::||.|:.|   |.:          ||:|.   :.::.||.|.      ....
plant   200 CAET-ESANWGEVFDPKTQTW---EPLPVPSPELRFSSMIRK---IEMIQGKFYV------RSND 251

  Fly   354 STVEVYDPRKNKWSQGCAMLCKRSAVGVAA---LDDCIYVCGGYDGVTSLNTVEVYY---PKSNT 412
            |...||||.:.||:             |||   |:|           :..:...|:|   |.|..
plant   252 SKDSVYDPIREKWN-------------VAAKPQLND-----------SRCSVGNVWYSCRPNSFL 292

  Fly   413 WKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVW--VKMSPMLNRRCRLGV 475
            |                                       :|.....|  :|....||..||.|:
plant   293 W---------------------------------------FDNEIKNWRLIKGLSSLNHSCRSGL 318

  Fly   476 ATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALA------ANMGKLWAIGG 534
            ...     ||  |.||..|    .:|..|...:.|    |:...:..|      ...|::|    
plant   319 IET-----VC--YDGNLLL----LWDKPTKPRRRV----CEDKYICCALISFNKRKNGQVW---- 364

  Fly   535 YDGESNLSTVEVYDPET 551
              |:...|.|.:..|.:
plant   365 --GKVEWSNVVLTVPSS 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 2/6 (33%)
PHA03098 36..510 CDD:222983 88/423 (21%)
KELCH repeat 329..372 CDD:276965 11/42 (26%)
KELCH repeat 376..417 CDD:276965 10/46 (22%)
KELCH repeat 423..466 CDD:276965 3/44 (7%)
KELCH repeat 470..514 CDD:276965 12/43 (28%)
Kelch_1 517..560 CDD:396078 7/41 (17%)
KELCH repeat 517..560 CDD:276965 7/41 (17%)
AT4G39753NP_568070.1 F-box_SF 40..78 CDD:459239 10/41 (24%)
NanM 172..>268 CDD:442289 32/129 (25%)
KELCH repeat 182..227 CDD:276965 16/48 (33%)

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