DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G39590

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_568062.1 Gene:AT4G39590 / 830113 AraportID:AT4G39590 Length:402 Species:Arabidopsis thaliana


Alignment Length:283 Identity:63/283 - (22%)
Similarity:94/283 - (33%) Gaps:92/283 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 IYAVGG--------LASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNG 349
            ||.:||        |....|..|.|.|.|..:..|:.|.:|.:.|.....:|::||:|..||...
plant   144 IYRIGGTVGDDSCPLGFDREPSSKVSILDCRSHTWRDGPRMRLNRRSSTTSVVDGKIYVTGGTED 208

  Fly   350 TERLS-TVEVYDPRKNKWS--------QGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEV 405
            |:..| .:||:||:...|.        :....:|.|.||.....|..:|:.|        :...|
plant   209 TDNPSHWIEVFDPKTQSWGTVTNPHIVKVWEEVCYRRAVKSIGHDGKLYLSG--------DKYVV 265

  Fly   406 YYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERY-DQAEDVWVKMSPMLNR 469
            |.|....|.:|.:..          |.|  ||:|..:  .:.|::..| ||....|         
plant   266 YDPDEGKWNSVEEHW----------LIG--YAIGSSN--CVVDNILFYWDQGVFKW--------- 307

  Fly   470 RCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMN-----------CKRSRVALA 523
                                          ||.:..:||.:..:.           ||  .|.|.
plant   308 ------------------------------YDSKVSSWKQLKGLEGLPDDFSQREYCK--LVDLG 340

  Fly   524 ANMGKLWAIGGYDGESNLSTVEV 546
            ..|..||....|.|...:...|:
plant   341 GKMAVLWDKWEYSGVCMIFCAEI 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 53/234 (23%)
KELCH repeat 329..372 CDD:276965 14/51 (27%)
KELCH repeat 376..417 CDD:276965 10/40 (25%)
KELCH repeat 423..466 CDD:276965 10/43 (23%)
KELCH repeat 470..514 CDD:276965 4/43 (9%)
Kelch_1 517..560 CDD:396078 8/30 (27%)
KELCH repeat 517..560 CDD:276965 8/30 (27%)
AT4G39590NP_568062.1 F-box_AtAFR-like 37..81 CDD:438923
KELCH repeat 137..184 CDD:276965 12/39 (31%)
NanM <138..273 CDD:442289 37/136 (27%)
KELCH repeat 188..233 CDD:276965 14/44 (32%)
Blue background indicates that the domain is not in the aligned region.

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