DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G39570

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_195667.1 Gene:AT4G39570 / 830111 AraportID:AT4G39570 Length:395 Species:Arabidopsis thaliana


Alignment Length:244 Identity:57/244 - (23%)
Similarity:93/244 - (38%) Gaps:46/244 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 STGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGF-NGTERLSTVEVYDPRKN 364
            |:|..:..:.:.:|..:.|.            |.|.:...:|.|||: ....|.|.|.:.|.|.:
plant   123 SSGNLLIPIPVPNPPLEHWS------------GHASVGSDIYFFGGYMEENVRSSRVVILDCRSH 175

  Fly   365 KWSQGCAMLCKRSAVGVAALDDCIYVCGGYDG--VTSLNTVEVYYPKSNTWKTVAQMMKYRSAGG 427
            ...:..::..:||....:.:|..|||.||.||  ..||..:||:..|:..|.. ..:..:....|
plant   176 TLREAPSLQMERSDPAASVIDGKIYVAGGVDGDDADSLYPIEVFDIKTQIWDH-RPIPYWEKDWG 239

  Fly   428 VTQLNGYVYALGGHDG---LSIFDSVERYDQAEDVW----VKMSPMLNRRCRLGVATLNGKIYVC 485
            ....:.||      ||   |:|...|..||..|..|    .:|.......|...:..:.      
plant   240 ALSRSAYV------DGKFYLTIGMKVMAYDLEESRWDFAGYQMGQSWFWSCNCVIENVL------ 292

  Fly   486 GGYC-GNSFLRSVECYDPQTDTWKLV----TPMNCKRSRVALAANMGKL 529
              || |::|    ..:|.:...||::    .|...:...|.:|...||:
plant   293 --YCYGDAF----RWFDTKLRLWKVMKVKGLPKLSRNVDVKIADYGGKM 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 52/219 (24%)
KELCH repeat 329..372 CDD:276965 11/43 (26%)
KELCH repeat 376..417 CDD:276965 16/42 (38%)
KELCH repeat 423..466 CDD:276965 13/49 (27%)
KELCH repeat 470..514 CDD:276965 9/48 (19%)
Kelch_1 517..560 CDD:396078 4/13 (31%)
KELCH repeat 517..560 CDD:276965 4/13 (31%)
AT4G39570NP_195667.1 F-box_AtAFR-like 32..75 CDD:438923
NanM 132..>269 CDD:442289 40/155 (26%)
KELCH repeat 145..183 CDD:276965 10/37 (27%)
KELCH repeat 187..232 CDD:276965 16/45 (36%)
Blue background indicates that the domain is not in the aligned region.

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