DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G39560

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_195666.2 Gene:AT4G39560 / 830110 AraportID:AT4G39560 Length:266 Species:Arabidopsis thaliana


Alignment Length:282 Identity:61/282 - (21%)
Similarity:103/282 - (36%) Gaps:84/282 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 AKVSQ---------SEEFLALDCEQLLELMRRDELNVRTEEVIFEACM--------KWVKYAEDK 218
            |:||:         |:.|.:|....  ||.....|..|||..:: .|:        :|  :...:
plant    40 ARVSRLDYPILSLVSKSFRSLIASP--ELYETRSLLGRTESCLY-LCLGIPSDFNPRW--FTLCR 99

  Fly   219 RSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQ 283
            :.:....|:||:.:|...|.                .|..|:....|                  
plant   100 KPKPSGHVMAAISIPNSRPV----------------HCSGLVAVGSD------------------ 130

  Fly   284 RSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFN 348
                     ||.:|| :...|..|:|.|.|.....|:....|.:.|:.....|::||:|..||..
plant   131 ---------IYNIGG-SIINEHSSSVSILDCRYHTWRDAPNMLVERNSHAANVIDGKIYVAGGSR 185

  Fly   349 GTERLSTVEVYDPRKNKW-------SQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVY 406
            .:...:.:||:|.:...|       :.||....::|||...|:  |::   ||.||.     ..|
plant   186 DSNSSNWMEVFDIKTQTWEPVLNPIADGCDRRIRKSAVIEEAI--CLF---GYKGVG-----VAY 240

  Fly   407 YPKSNTWKTVAQMMKYRSAGGV 428
            .|:.:.|:.:.: :.|...|.|
plant   241 NPRIDKWEAIGE-VNYLDLGWV 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 61/282 (22%)
KELCH repeat 329..372 CDD:276965 13/49 (27%)
KELCH repeat 376..417 CDD:276965 12/40 (30%)
KELCH repeat 423..466 CDD:276965 2/6 (33%)
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT4G39560NP_195666.2 F-box_AtAFR-like 27..70 CDD:438923 8/31 (26%)
NanM <118..252 CDD:442289 40/187 (21%)
KELCH repeat 123..162 CDD:276965 12/66 (18%)
KELCH repeat 166..214 CDD:276965 11/47 (23%)
Blue background indicates that the domain is not in the aligned region.

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