DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G39550

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_195665.1 Gene:AT4G39550 / 830109 AraportID:AT4G39550 Length:392 Species:Arabidopsis thaliana


Alignment Length:380 Identity:80/380 - (21%)
Similarity:128/380 - (33%) Gaps:122/380 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 SELFPQVLAAV----RLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKD---------FHLMPE 271
            |.|:...|:.|    |..:.||.....|    .|:..:..|..:..:.||         ..|.|.
plant    40 SRLYYPTLSLVSKSFRSLIASPDLYKTR----SLLGRTESCLYVCLQEKDSDPNPRWFTLCLKPN 100

  Fly   272 R---RGLLQSFRTRQRSGEFFTGQIYAV-----------GGLASTGESV------------STVE 310
            |   ..:.:..:.:::..:..:|.:.|.           .||.:.|.::            |.|.
plant   101 RTLTNDITEKKKKKKKKKKMSSGYVLAAIPVLHSRPAYWSGLVAVGSNIYNIGGPIDKAHSSIVS 165

  Fly   311 IYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLST-VEVYDPRKNKWSQ------ 368
            :.|..:..|..|..|.:.|......|:.||:|..||.......|. :||:|||...|..      
plant   166 VLDCQSHTWHEGPGMRVERRYPAANVVEGKIYVTGGCKDCSNSSNWMEVFDPRTQTWESVSSPGA 230

  Fly   369 ---GCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGG--- 427
               ||::  .:|||    ::..|.:...: |:       :|.||...|    :.||:....|   
plant   231 EIGGCSI--HKSAV----VEGEILIANSH-GL-------IYKPKEGRW----ERMKWDMDIGWVW 277

  Fly   428 ----VTQLNGYVYALGGHDGLSIFDSVERYDQAEDVW-----VKMSPMLNRRCRLGVATLNGKIY 483
                |.:...|.|..|      :|   :.||....:|     ||..|.. .||...:|...||:.
plant   278 YSYCVVENVLYYYYKG------VF---KWYDTMARLWRDLKGVKGLPRF-ARCGGKMADYGGKMA 332

  Fly   484 VCGGYCGNSFLRSVECYDPQTDTW-KLVTPMN-CKRSRVALAA------NMGKLW 530
            |                     .| |:||..: ||...:..|.      |..::|
plant   333 V---------------------FWDKIVTSDDGCKNKMILCAVIALERRNSEEIW 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 73/351 (21%)
KELCH repeat 329..372 CDD:276965 16/52 (31%)
KELCH repeat 376..417 CDD:276965 9/40 (23%)
KELCH repeat 423..466 CDD:276965 11/54 (20%)
KELCH repeat 470..514 CDD:276965 10/44 (23%)
Kelch_1 517..560 CDD:396078 3/20 (15%)
KELCH repeat 517..560 CDD:276965 3/20 (15%)
AT4G39550NP_195665.1 F-box_AtAFR-like 25..67 CDD:438923 7/26 (27%)
KELCH repeat 138..180 CDD:276965 8/41 (20%)
NanM <140..333 CDD:442289 53/220 (24%)
KELCH repeat 184..229 CDD:276965 14/44 (32%)
KELCH repeat 232..267 CDD:276965 11/52 (21%)
Blue background indicates that the domain is not in the aligned region.

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