DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G36840

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_195402.3 Gene:AT4G36840 / 829837 AraportID:AT4G36840 Length:238 Species:Arabidopsis thaliana


Alignment Length:236 Identity:48/236 - (20%)
Similarity:81/236 - (34%) Gaps:72/236 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 SGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRS-RVGVAVLNGKLYAFGGFN 348
            |.....|:||..||.....:|.:..|::||:.:.|.:.....|..| ...|.:...|:||     
plant     9 SASLIDGKIYVFGGCPEDADSSNWAEVFDPVYQTWGIFNTPKMAHSINQSVVIEEKKVYA----- 68

  Fly   349 GTERLSTVEVYD------PRKNK-WSQGCAMLCKRSAVGVAALDDCI----YVCGGYDG------ 396
                   |:..|      |.:.: |..|    .|.|.|| :..|.|:    ..|....|      
plant    69 -------VDEEDQSFSFLPSEGRIWKSG----KKDSKVG-SRHDWCVIGKLLYCRATRGRILWCQ 121

  Fly   397 --------VTSLNTVEVYY--------------PKSNTWKTVAQMMKYRSAGGVTQLNGYVYALG 439
                    |..|..:::|.              |.....|...:.:...|||.:. :.|..: :|
plant   122 PDELDWKEVKGLEQLQLYLSGTRYIFRRTSDKRPSKTNVKYDIRKISSNSAGNIV-IFGNAH-IG 184

  Fly   440 GHDGLSIFD---SVERYDQAEDVW---------VKMSPMLN 468
            ..:.:.::.   |:||.:..| :|         .|:.|:.|
plant   185 DPECVELWSAEISMERREGGE-IWGKIEWSNVVFKLDPLSN 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045
PHA03098 36..510 CDD:222983 48/236 (20%)
BACK 143..245 CDD:285009
Kelch 292..339 CDD:128874 12/47 (26%)
KELCH repeat 329..372 CDD:276965 10/50 (20%)
Kelch 340..386 CDD:128874 12/52 (23%)
KELCH repeat 376..417 CDD:276965 12/72 (17%)
Kelch 387..433 CDD:128874 11/77 (14%)
KELCH repeat 423..466 CDD:276965 11/54 (20%)
Kelch 435..480 CDD:128874 9/46 (20%)
Kelch_1 469..514 CDD:279660 48/236 (20%)
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
AT4G36840NP_195402.3 Kelch_1 4..43 CDD:279660 10/33 (30%)
KELCH repeat 5..47 CDD:276965 11/37 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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