DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G35120

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_195238.1 Gene:AT4G35120 / 829664 AraportID:AT4G35120 Length:389 Species:Arabidopsis thaliana


Alignment Length:304 Identity:68/304 - (22%)
Similarity:115/304 - (37%) Gaps:92/304 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 ASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKN 364
            |.|..|:|...:.|.:...:......|..||   :::::...|:.        ||:.|:|..|.:
plant    19 AQTPLSMSISSLPDEIVLSFLALISKSYYRS---LSLVSKSFYSL--------LSSTEIYAARSH 72

  Fly   365 KWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQM--------MK 421
                            :.|.:.|.|||             ::.||.:.|.|:|::        ::
plant    73 ----------------IGATEPCPYVC-------------LWLPKKHRWFTLAEIEGKLSLEPVR 108

  Fly   422 YRSAGGVTQLNG-------YVYALGGHDGLSIFDSVERYDQAEDVWV---KMSPMLNRRCRLGVA 476
            ..|:...|::|.       .:|.:||    ::.....|.....|.|.   :.:|.: |..|:|..
plant   109 LSSSYPRTRVNSTTVAAGTEIYKIGG----TVKGKRSRAVFVLDCWTHRWRRAPNM-RVSRVGAK 168

  Fly   477 T--LNGKIYVCGGYCGNSFLRSVEC---YDPQTDTWK-LVTP-MN-CKRSRVALAANMGKLWAI- 532
            :  |:|.|||.|| |..|...|:.|   :|.:|.||. |.:| :| ...|...:|.:..:|:.| 
plant   169 SCFLDGNIYVIGG-CRKSEEESMNCGEVFDLKTQTWNPLPSPSVNYAVHSNHKVAVSGERLYVIT 232

  Fly   533 --GGYDGESNLSTVEVYDPETDKW-------TFMPPMCAHSGGV 567
              ..|          .|||...:|       ...|.....|||:
plant   233 KRNNY----------AYDPNEGRWLPDVGSVDLQPITGPWSGGI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 52/233 (22%)
KELCH repeat 329..372 CDD:276965 8/42 (19%)
KELCH repeat 376..417 CDD:276965 9/40 (23%)
KELCH repeat 423..466 CDD:276965 9/52 (17%)
KELCH repeat 470..514 CDD:276965 19/50 (38%)
Kelch_1 517..560 CDD:396078 10/52 (19%)
KELCH repeat 517..560 CDD:276965 10/52 (19%)
AT4G35120NP_195238.1 F-box_AtAFR-like 26..70 CDD:438923 10/54 (19%)
NanM 114..>246 CDD:442289 38/147 (26%)
KELCH repeat 117..160 CDD:276965 8/46 (17%)
KELCH repeat 164..210 CDD:276965 18/46 (39%)
Blue background indicates that the domain is not in the aligned region.

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