DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and AT4G34170

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_195143.1 Gene:AT4G34170 / 829565 AraportID:AT4G34170 Length:293 Species:Arabidopsis thaliana


Alignment Length:293 Identity:72/293 - (24%)
Similarity:117/293 - (39%) Gaps:64/293 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 LLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQS---FRTRQRSGEFFTGQIYA 295
            :|....:.:.:||  :.||:|....|:  .|.||      .||.|   ::||...|.  |.:.: 
plant    14 MLHDDLILNCLAR--VSRSNHPTLSLV--CKRFH------SLLASVELYQTRTLLGR--TERCF- 65

  Fly   296 VGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYD 360
                            |...:.:..:.:.:|...:..|:||:...:.|.||...:..||:|.|.|
plant    66 ----------------YRQYSSRKILVQILSPNSTSAGIAVVGPNIDAIGGGIKSNTLSSVMVMD 114

  Fly   361 PRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSA 425
            .|.:.|.:..:|...|....|..||..|||.||.|.:.|.|.:||:..|:.||:.: |:......
plant   115 SRSHTWREAPSMRVPRMFPSVCTLDGKIYVMGGCDNLDSTNWMEVFDTKTQTWEFL-QIPSEEIF 178

  Fly   426 GGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNR----RCRLGVATLNGKIYVCG 486
            ||                 |.::|| ||:....||.:...:..:    |......:.||..:...
plant   179 GG-----------------SAYESV-RYEGTVYVWSEKKDVTYKLHEGRWSAADMSANGWGWPGS 225

  Fly   487 GYC------GNSFLRSVECYDPQTDTWKLVTPM 513
            .||      .:.|:..:..|||:...|   ||:
plant   226 SYCVIENVLYSCFVHKIRWYDPKERVW---TPL 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 70/288 (24%)
KELCH repeat 329..372 CDD:276965 13/42 (31%)
KELCH repeat 376..417 CDD:276965 17/40 (43%)
KELCH repeat 423..466 CDD:276965 9/42 (21%)
KELCH repeat 470..514 CDD:276965 12/50 (24%)
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT4G34170NP_195143.1 F-box_AtAFR-like 15..55 CDD:438923 13/49 (27%)
NanM <41..161 CDD:442289 39/144 (27%)
KELCH repeat 85..126 CDD:276965 13/40 (33%)
NanM 119..>259 CDD:442289 41/159 (26%)
KELCH repeat 130..170 CDD:276965 17/39 (44%)
KELCH repeat 219..260 CDD:276965 10/40 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.