DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G33900

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_567939.1 Gene:AT4G33900 / 829533 AraportID:AT4G33900 Length:379 Species:Arabidopsis thaliana


Alignment Length:287 Identity:65/287 - (22%)
Similarity:97/287 - (33%) Gaps:111/287 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 GVAVLNGKLYAFGG--------FNGT-----ERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAAL 384
            |..|:..::||.||        .|.|     ..||:|.|.|.|.:.|.:..:|...|.......|
plant   109 GFVVVGHEIYAIGGGSENKNASINATGSKTYNALSSVMVMDSRSHTWREAPSMRVARVFPSACTL 173

  Fly   385 DDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTV----AQMMKYRSAGGVTQLNGYVYALGGHDGLS 445
            |..|||.||.:.:.|:|.:|::..|:.||:.:    .::.|                  |.:.||
plant   174 DGRIYVTGGCENLNSMNWMEIFDTKTQTWEFLQIPSEEVCK------------------GSEYLS 220

  Fly   446 IFDSVERY----DQAEDVWVKMSP--------MLNR-----------------RCRLG------- 474
            |  |.:|.    .:.:||..||..        .||.                 ||.||       
plant   221 I--SYQRTVYVGSREKDVTYKMHKGKWRGADICLNHGWSLDPSSCCVIENVFYRCSLGDVRWYDL 283

  Fly   475 ----VATLNG-----------KIYVCGGYCGNSFLRSVECY---DPQTDTWKLVTPMNCKRSRVA 521
                .|.|.|           :.:....:||...: |.|.|   |.:|..|       |....:.
plant   284 KKREW
AALKGLEGLPTFTNYYRNFKSADHCGKLAI-SWEEYVLVDDETKIW-------CAEIAIQ 340

  Fly   522 LAANMGKLWAIGGYDGESNLSTVEVYD 548
            ...| |::|           .|:|.:|
plant   341 KRQN-GEIW-----------GTLEWFD 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 58/247 (23%)
KELCH repeat 329..372 CDD:276965 15/51 (29%)
KELCH repeat 376..417 CDD:276965 14/44 (32%)
KELCH repeat 423..466 CDD:276965 10/54 (19%)
KELCH repeat 470..514 CDD:276965 15/68 (22%)
Kelch_1 517..560 CDD:396078 6/32 (19%)
KELCH repeat 517..560 CDD:276965 6/32 (19%)
AT4G33900NP_567939.1 F-box_AtAFR-like 15..55 CDD:438923
PHA03098 <88..288 CDD:222983 47/198 (24%)
KELCH repeat 109..162 CDD:276965 15/52 (29%)
NanM <111..>203 CDD:442289 28/91 (31%)
KELCH repeat 165..205 CDD:276965 14/39 (36%)
Blue background indicates that the domain is not in the aligned region.

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