DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G29370

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_194666.1 Gene:AT4G29370 / 829058 AraportID:AT4G29370 Length:378 Species:Arabidopsis thaliana


Alignment Length:356 Identity:76/356 - (21%)
Similarity:120/356 - (33%) Gaps:88/356 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 KRSELFPQVLAAVRLPLLSP-QFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQS--- 278
            |:::| |.:.....|.|..| :.|.:.:||  |.:||::...|:  .|.|      |.||.|   
plant    12 KKTKL-PSLPCETSLFLQLPDEILVNCLAR--LSKSSYRSLSLV--CKTF------RSLLHSQPL 65

  Fly   279 FRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAV------- 336
            :..|.:.|......:|......:..|.||          :|     .::.|....|.|       
plant    66 YSARYQLGTTEICCLYLCLRFVTATEPVS----------RW-----FTLSRRSGSVLVPSDHSLP 115

  Fly   337 -------LNGKLY------AFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCI 388
                   :..|:|      |||      ..|.:.:||.....|.....|..||.......|||.|
plant   116 YSNSTVTMGSKIYGEHMGDAFG------PSSAIWIYDCFTRSWGDVPNMKMKRENASACVLDDKI 174

  Fly   389 YVCGGYDGVTSLNTVEVYYPKSNTWKTV-----AQMMKYRSAGGVTQLNGYVYALGGHDGLSIFD 448
            ||.||.|. ..:|..|::..|:..|:.:     .::|...:...:..:.|.:|.   ..|....|
plant   175 YVMGGCDS-GGINWFEMFDVKTQCWRPLPANPDVKVMTEDNVRKIDVVGGKIYV---KTGAEFMD 235

  Fly   449 SVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKIYV--CGGYCGNSFLRSVECYDPQTDTWKLV- 510
            .:  ||.....|......::.........:...:|.  |..|         ..||.:...|:.| 
plant   236 WI--YDVKRGKWSAADEYMSLLWSNSWCVIENVMYCYSCSRY---------RWYDLEARMWREVK 289

  Fly   511 ---------TPMNCKRSRVALAANMGKLWAI 532
                     :..|..|:|:....|.|...||
plant   290 GLKYLKRYSSASNDNRNRMVELVNFGGKLAI 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 68/322 (21%)
KELCH repeat 329..372 CDD:276965 12/62 (19%)
KELCH repeat 376..417 CDD:276965 14/45 (31%)
KELCH repeat 423..466 CDD:276965 7/42 (17%)
KELCH repeat 470..514 CDD:276965 7/55 (13%)
Kelch_1 517..560 CDD:396078 6/16 (38%)
KELCH repeat 517..560 CDD:276965 6/16 (38%)
AT4G29370NP_194666.1 F-box_AtAFR-like 25..69 CDD:438923 16/53 (30%)
NanM 113..>248 CDD:442289 33/146 (23%)
KELCH repeat 116..158 CDD:276965 9/47 (19%)
KELCH repeat 162..205 CDD:276965 14/43 (33%)
Blue background indicates that the domain is not in the aligned region.

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