DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G03030

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_192212.2 Gene:AT4G03030 / 828110 AraportID:AT4G03030 Length:442 Species:Arabidopsis thaliana


Alignment Length:216 Identity:54/216 - (25%)
Similarity:83/216 - (38%) Gaps:60/216 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 SLNTVEVYYPKSNTWKTVAQMMKYRSAGGV-----TQLNGYVYALGGHDGLSIFD---------- 448
            |::...::.|.:.:|:::..|.......|:     ..|..|||.|||    |.||          
plant   105 SISPPFLFDPVTLSWRSLPLMPCNPHVYGLCNFVAVALGPYVYVLGG----SAFDTRSYPLDVPL 165

  Fly   449 ---SVERYDQAEDVWVKMSPMLNRRCRLGVATLN---GKIYVCGG-------YCGNSFLRSVECY 500
               ||.||...:.||.::|||::.|.....|.:.   |:|.|.||       ....|.:.|||.|
plant   166 PTSSVFRYSFVKSVWERLSPMMSPRGSFACAAMPGSCGRIIVAGGGSRHTLFGAAGSRMSSVEMY 230

  Fly   501 DPQTDTWKLVTPMNCKRSRVALAANM-------------GKLWAIGGYDGESNLSTV----EVY- 547
            |.:.|.|:::..:  .|.|......:             .:.|.:|||.|...:|.:    |.| 
plant   231 DVEKDEWRVMNEL--PRFRAGCVGFLVENEKEKEKEEEGREFWVMGGYGGSRTVSGILPVDEYYK 293

  Fly   548 -----DPETD---KWTFMPPM 560
                 |...|   ||..:..|
plant   294 DAVVMDLRVDGGEKWRVVGDM 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 39/138 (28%)
KELCH repeat 329..372 CDD:276965
KELCH repeat 376..417 CDD:276965 3/17 (18%)
KELCH repeat 423..466 CDD:276965 18/60 (30%)
KELCH repeat 470..514 CDD:276965 15/53 (28%)
Kelch_1 517..560 CDD:396078 14/68 (21%)
KELCH repeat 517..560 CDD:276965 14/68 (21%)
AT4G03030NP_192212.2 F-box_SF 38..82 CDD:459239
NanM 110..381 CDD:442289 53/211 (25%)
KELCH repeat 135..186 CDD:276965 17/54 (31%)
KELCH repeat 190..244 CDD:276965 15/55 (27%)
KELCH repeat 247..315 CDD:276965 14/68 (21%)
Blue background indicates that the domain is not in the aligned region.

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