DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G19870

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_193722.2 Gene:AT4G19870 / 827733 AraportID:AT4G19870 Length:400 Species:Arabidopsis thaliana


Alignment Length:403 Identity:86/403 - (21%)
Similarity:139/403 - (34%) Gaps:137/403 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 DKYIDQNFAKVSQS-EEFLALDCEQLLELMRRDELNV------RTEEVIFEACMKWVKYAEDKRS 220
            |:.::...|::|:| ...|::..:....::...||.|      .|||.:: .|:      .||..
plant    35 DEIVENCLARISRSYYPTLSIVSKSFRSIISSTELYVARSHLRNTEECVY-VCL------SDKSF 92

  Fly   221 ELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQRS 285
            | ||:.......|..:...:..:..:::.|..      ||......:|.|.           .:|
plant    93 E-FPKWFTLWVNPNQANSMVEKKRKKKKTIGK------LLVPIPSSNLSPV-----------SKS 139

  Fly   286 GEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFN-- 348
            ......:||.:||... |...|.|.|.|..:..|:....|::.|.|..:.:.:||:|..||:|  
plant   140 AIAVGSEIYVIGGKVD-GALSSAVRILDCRSNTWRDAPSMTVARKRPFICLYDGKIYVIGGYNKL 203

  Fly   349 -----------------------GTE-------RLSTVE------------VYDPRKNKWS--QG 369
                                   |||       |::.:|            .|||::.:|.  :|
plant   204 SESEPWAEVFDIKTQTWECLSDPGTEIRNCTIYRIAEIEGKIHFGYTQKTYAYDPKQGEWECCEG 268

  Fly   370 CAMLCKRSAVGVAAL----------DDCIYVC-----GGY----DGVTSLNTVEVYY----PKSN 411
            .....:...|..:.|          ||  |.|     .||    .|:.||  :|::.    ...|
plant   269 EVAFPRSQCVMESVLYTFANNYTWEDD--YGCKWWSTDGYGEKVKGLESL--LEIHKRNGGSSDN 329

  Fly   412 TWKTVAQMMKYRSAGGVTQL--NGY--------------VYALGGHDGLSIFDSVERYDQAEDVW 460
            |.|.||       .||...|  .||              |.||...||..::..||        |
plant   330 TTKLVA-------CGGKLLLLWEGYMKHNPNNRKKIWCAVIALEKRDGGKVWGIVE--------W 379

  Fly   461 VKMSPMLNRRCRL 473
            |.:..::...|:|
plant   380 VDVVHIVPTSCKL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 86/403 (21%)
KELCH repeat 329..372 CDD:276965 18/88 (20%)
KELCH repeat 376..417 CDD:276965 15/63 (24%)
KELCH repeat 423..466 CDD:276965 14/58 (24%)
KELCH repeat 470..514 CDD:276965 2/4 (50%)
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT4G19870NP_193722.2 F-box_AtAFR-like 35..73 CDD:438923 8/37 (22%)
NanM 139..>264 CDD:442289 28/125 (22%)
KELCH repeat 139..178 CDD:276965 11/39 (28%)
KELCH repeat 182..227 CDD:276965 8/44 (18%)
Blue background indicates that the domain is not in the aligned region.

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