DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and AT4G19250

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_193660.1 Gene:AT4G19250 / 827665 AraportID:AT4G19250 Length:228 Species:Arabidopsis thaliana


Alignment Length:184 Identity:46/184 - (25%)
Similarity:71/184 - (38%) Gaps:29/184 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 VEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKW------- 366
            |.:||.|..|.:....|.:.|:.....||:||||..||....|.....||:||:...|       
plant     7 VWVYDKLIGKQRKAPSMMVARTNAFTCVLDGKLYVMGGCEADESTHWAEVFDPKTQTWEALPDPG 71

  Fly   367 -------------SQGCAMLCKRSAVGVAALDDCIY-VCGGYDGVTSLNTVEVYYPKSNT--WKT 415
                         .||...:.......|..:.:|:: |.....|.::.....|.|..||.  |..
plant    72 VELRYSSVKNIQTKQGKVYVRSNKKNFVYLIKECMWEVAEENLGESTCEIENVCYCYSNKRYWWY 136

  Fly   416 VAQMMKYRSAGGVTQLNGYVYA---LGGHDG-LSIF--DSVERYDQAEDVWVKM 463
            .|:..::|...||:.|..|...   :|.:.| |.:|  .:|.|....:::|..|
plant   137 DAKCEEWRLVKGVSGLYEYYKTDSEIGNYGGKLVVFWDRAVSRLTATKEIWCAM 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 46/184 (25%)
KELCH repeat 329..372 CDD:276965 17/62 (27%)
KELCH repeat 376..417 CDD:276965 9/43 (21%)
KELCH repeat 423..466 CDD:276965 13/47 (28%)
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT4G19250NP_193660.1 NanM <2..>91 CDD:442289 23/83 (28%)
KELCH repeat 27..69 CDD:276965 15/41 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.