DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and AT4G11770

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_192914.1 Gene:AT4G11770 / 826783 AraportID:AT4G11770 Length:396 Species:Arabidopsis thaliana


Alignment Length:201 Identity:48/201 - (23%)
Similarity:87/201 - (43%) Gaps:23/201 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 IYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVE 357
            ||.:||..: |...|.|...|..:..|.....|.:.|....|.||:||:|...|:.|::..:.:|
plant   152 IYMIGGYIN-GVLSSRVFFLDCRSHTWHEAPSMQVARKSPLVNVLDGKIYVVEGWRGSDYSNLIE 215

  Fly   358 VYDPRKNKW----SQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVA- 417
            ::||:..||    |....|..:..:.|: ..::.:|:.|..:        .||.||.:.|..:. 
plant   216 IFDPKTQKWEHVPSPSAEMRGRYISKGL-VYEEKLYLFGDKN--------VVYKPKESRWDALGF 271

  Fly   418 ----QMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATL 478
                .::.|.|:..:..:...|:    :..|..:||..||.:......|:..:.:||..:.:...
plant   272 DMNLWLVSYGSSCVIDNVCYMVF----YKRLIWYDSEVRYWRVLKGLEKLPKLRHRRSCIRMVDY 332

  Fly   479 NGKIYV 484
            .|||.:
plant   333 GGKIAI 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 48/201 (24%)
KELCH repeat 329..372 CDD:276965 15/46 (33%)
KELCH repeat 376..417 CDD:276965 8/40 (20%)
KELCH repeat 423..466 CDD:276965 8/42 (19%)
KELCH repeat 470..514 CDD:276965 4/15 (27%)
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT4G11770NP_192914.1 F-box_AtAFR-like 12..55 CDD:438923
KELCH repeat 141..183 CDD:276965 9/31 (29%)
NanM <147..339 CDD:442289 48/201 (24%)
KELCH repeat 187..234 CDD:276965 15/46 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.