DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT3G63220

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_974481.1 Gene:AT3G63220 / 825497 AraportID:AT3G63220 Length:352 Species:Arabidopsis thaliana


Alignment Length:343 Identity:76/343 - (22%)
Similarity:130/343 - (37%) Gaps:70/343 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 HLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTV---------EIYDPLTKKWKMG 322
            ||.|....:.:|:|...||.|.|     .|.....:.|.:..|         ::|.|...:|.  
plant    30 HLHPNLELVSRSWRAAIRSHELF-----RVRKELRSSEHLLCVCAFDPENIWQVYSPNCDRWL-- 87

  Fly   323 EQMSMMRSRV------GVAVLNGKLYAFGG-----------FNGTERLSTVEVYDPRKNKWSQGC 370
             .:.::.||:      |.....|.|:..||           .:||.....|..||..:.:|:...
plant    88 -TLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGDHDGTFATDQVWSYDFVQRQWTPRA 151

  Fly   371 AMLCKRSAVGVAALDDCIYVCGGYDGV-TSLNTVEVYYPKSNTWKTVAQM-MKYRSAGGVTQLNG 433
            :||..|:......|...|.|.||:... .|::..|:|.|:::.|.::..: ..:.||.....:||
plant   152 SMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEMYDPENDVWTSIPDLHQTHNSACSGLVVNG 216

  Fly   434 YVYALGGHDGLS---IFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLR 495
            .|:.|  |.|||   :.:||:.....:|......||:         .:...:||         :.
plant   217 KVHVL--HKGLSTVQVLESVKLGWDVKDYGWPQGPMV---------VVEDVLYV---------MS 261

  Fly   496 SVECYDPQTDTWKLVTPMNCKRSRVALAAN--MGKLWAIGGYDGESN-------LSTVEVYDPET 551
            ....:..:.||||:|...:..:.|:.:|..  ..::..:||..|...       ||.|:......
plant   262 HGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPDRLNWDIKPLSDVDALTVGN 326

  Fly   552 DK--WTFMPPMCAHSGGV 567
            |:  |..:.||....|.:
plant   327 DRPAWRSVAPMTRCRGTI 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 62/273 (23%)
KELCH repeat 329..372 CDD:276965 13/59 (22%)
KELCH repeat 376..417 CDD:276965 11/41 (27%)
KELCH repeat 423..466 CDD:276965 13/45 (29%)
KELCH repeat 470..514 CDD:276965 7/43 (16%)
Kelch_1 517..560 CDD:396078 10/53 (19%)
KELCH repeat 517..560 CDD:276965 10/53 (19%)
AT3G63220NP_974481.1 F-box_AtAFR-like 11..55 CDD:438923 9/29 (31%)
NanM 71..306 CDD:442289 55/257 (21%)
KELCH repeat 100..153 CDD:276965 11/52 (21%)
KELCH repeat 157..202 CDD:276965 11/44 (25%)
KELCH repeat 285..337 CDD:276965 10/51 (20%)
Blue background indicates that the domain is not in the aligned region.

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