DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT3G46050

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_190191.1 Gene:AT3G46050 / 823748 AraportID:AT3G46050 Length:370 Species:Arabidopsis thaliana


Alignment Length:236 Identity:56/236 - (23%)
Similarity:88/236 - (37%) Gaps:66/236 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 AMLCK--------------RSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPK-SNTWKTVAQMM 420
            :::||              ||.:|  ..:..:|||        |:.....||. ...|..|:.:.
plant    42 SLVCKGFRSLLDSRELHATRSCIG--KTESFLYVC--------LDLHRNCYPDCPPRWFIVSPIT 96

  Fly   421 KYR---------SAGGVTQLNGYVYALGGH-DGLSIFDSVER---YDQAEDVWVKMSPMLNRRCR 472
            |.:         .:..|..:...:|.:||. ||    .|..|   .|.....|.::..|...|..
plant    97 KQKLKPIPSVTCQSSTVVSIGSKIYIIGGFVDG----HSSRRLIVLDCPSHGWRRLPEMRVPRQN 157

  Fly   473 LGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTP----MNCKRSRVALAANM-GKLWAI 532
            .....:|.||||.||...|:.....|.|||:|.||:.|.|    :..:.|.|..:..| ||::.:
plant   158 AAADVINDKIYVIGGSSSNNIEDWGEVYDPKTQTWEPVLPTTLDLTVQMSVVPGSLVMSGKVYDM 222

  Fly   533 GG--YDGESNLSTVEV----------------YDPETDK-W 554
            .|  .:.:.|:..||:                .:||.|: |
plant   223 NGLKLNFQKNICLVEIENMMCQTKVCEGVLVWCEPEEDRGW 263

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 41/166 (25%)