DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT3G43710

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_189957.1 Gene:AT3G43710 / 823479 AraportID:AT3G43710 Length:378 Species:Arabidopsis thaliana


Alignment Length:291 Identity:68/291 - (23%)
Similarity:102/291 - (35%) Gaps:85/291 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 ELMRRDELNVRTEEVIFEACMKWVKYAEDKRSELF-----PQVLAAVRLPLLS----PQFLADRV 244
            ||.:...|...||..:| .|::.|..:...|  ||     |..|..|.:|:||    |:||.|.|
plant    64 ELYQTRNLLGSTESFLF-VCLRIVNDSNPLR--LFTLCRRPNSLTKVMVPILSPDSIPKFLPDVV 125

  Fly   245 AREELIRSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTV 309
                |:.|:                                       ||.:|||.:...| ..|
plant   126 ----LVGSN---------------------------------------IYVIGGLINNNAS-HKV 146

  Fly   310 EIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKW---SQGCA 371
            .:.|..:..|:..:...:.|......||:||:|..||....:....:||:|.:...|   |....
plant   147 MVMDCRSHTWREAQGTCVARVSPSACVLDGKIYVAGGCKNLDATMWMEVFDTKTESWEFVSSPGE 211

  Fly   372 MLCKRSAVGVAALDDCIYVCGGYDG---VTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQ--- 430
            .:|:       .|..|..:  ||||   |.|:.|..:|......|:.....|   |.||...   
plant   212 EICR-------DLTSCESI--GYDGNVYVESMKTYGLYELHKGRWREGQYSM---SRGGSLSSQC 264

  Fly   431 -LNGYVYALGGHDGLSIFDSVERYDQAEDVW 460
             ::..:|....:       .||.||....:|
plant   265 VIDNVLYRSWSY-------MVEWYDSENKLW 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 68/291 (23%)
KELCH repeat 329..372 CDD:276965 13/45 (29%)
KELCH repeat 376..417 CDD:276965 11/43 (26%)
KELCH repeat 423..466 CDD:276965 9/42 (21%)
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT3G43710NP_189957.1 F-box_AtAFR-like 29..69 CDD:438923 2/4 (50%)
NanM <124..288 CDD:442289 46/226 (20%)
KELCH repeat 124..162 CDD:276965 12/81 (15%)
KELCH repeat 166..212 CDD:276965 13/45 (29%)
Blue background indicates that the domain is not in the aligned region.

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