DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT3G27910

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_189429.1 Gene:AT3G27910 / 822414 AraportID:AT3G27910 Length:294 Species:Arabidopsis thaliana


Alignment Length:288 Identity:65/288 - (22%)
Similarity:109/288 - (37%) Gaps:75/288 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 QIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLST- 355
            :||..||..: |:..|.|.:.|.|...::....|.:.|......:::||:|..||:|..:.|.. 
plant    48 KIYVFGGCIN-GDMTSNVFVIDCLHGTFQFLPSMRVPRGCAAFGIVDGKIYVIGGYNKADSLDNW 111

  Fly   356 VEVYDPRKNKWSQGCAMLCKRSAVGV----AALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTV 416
            |||:|..|..| :..:.||......:    ..::..||:....:|:       |:.||...|:..
plant   112 VEVFDLEKQTW-ESFSGLCNEELSKITLKSVVMNKKIYIMDRGNGI-------VFDPKKGVWERD 168

  Fly   417 AQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVER------YDQAEDVW---------VKMSPM 466
            ..:.:....|... ::..:|..|       ||||:|      ||.:..||         .||...
plant   169 FLLDRDWVVGSCV-IDNMLYTFG-------FDSVKRIYRVRVYDPSVRVWSFVKGIEDIPKMDGT 225

  Fly   467 LNRRCRLGVATLNGKIYVC------GGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAAN 525
            |..|    :|...||:.:.      ||                |:.|       |.:..:.....
plant   226 LGSR----MANHGGKLVILLNLDKNGG----------------TELW-------CIKIALERRGQ 263

  Fly   526 MGKLWA-IGGYD----GESNLSTVEVYD 548
            .|::|. |..|:    .|::.:.||.:|
plant   264 QGEIWGKILWYNLVLTLENSSTIVECFD 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045
PHA03098 36..510 CDD:222983 56/243 (23%)
BACK 143..245 CDD:285009
Kelch 292..339 CDD:128874 11/46 (24%)
KELCH repeat 329..372 CDD:276965 14/43 (33%)
Kelch 340..386 CDD:128874 14/50 (28%)
KELCH repeat 376..417 CDD:276965 7/44 (16%)
Kelch 387..433 CDD:128874 8/45 (18%)
KELCH repeat 423..466 CDD:276965 14/57 (25%)
Kelch 435..480 CDD:128874 16/59 (27%)
Kelch_1 469..514 CDD:279660 8/50 (16%)
KELCH repeat 470..514 CDD:276965 8/49 (16%)
Kelch_1 517..560 CDD:279660 8/37 (22%)
KELCH repeat 517..560 CDD:276965 8/37 (22%)
AT3G27910NP_189429.1 Kelch 48..94 CDD:128874 11/46 (24%)
Kelch_1 83..123 CDD:279660 14/40 (35%)
KELCH repeat 84..130 CDD:276965 15/46 (33%)
KELCH repeat 173..213 CDD:276965 12/47 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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