DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT3G27150

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_189351.1 Gene:AT3G27150 / 822334 AraportID:AT3G27150 Length:422 Species:Arabidopsis thaliana


Alignment Length:225 Identity:54/225 - (24%)
Similarity:81/225 - (36%) Gaps:63/225 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 YDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYR 423
            |:...:||.:|.||:..|.....|.....::|.||                              
plant   185 YELETSKWFKGPAMITPRILFASATCGTVVFVAGG------------------------------ 219

  Fly   424 SAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGG- 487
                        ..:.|:..:.:.||||:||.....|..:..|..||.......|.||.||.|| 
plant   220 ------------LKIEGNGTMEVVDSVEKYDSKTKTWTLLRGMHKRRKFCSGCYLRGKFYVLGGR 272

  Fly   488 -------YCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWAIGG--YDGESNLST 543
                   .||       |.||.:|:||:|: |...|....:...:...:..:|.  |..|::.:.
plant   273 DENGQNLTCG-------ESYDEKTNTWELI-PDILKDMSFSSVQSPPLIAVVGDDLYSLETSANE 329

  Fly   544 VEVYDPETDKWTFM--PPMCAHSGGVGAGV 571
            :.|||...:.|..:  .|:.|.|.| |.||
plant   330 LRVYDANANSWKKLGDVPVRAKSNG-GWGV 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 37/158 (23%)
KELCH repeat 329..372 CDD:276965 4/12 (33%)
KELCH repeat 376..417 CDD:276965 5/40 (13%)
KELCH repeat 423..466 CDD:276965 8/42 (19%)
KELCH repeat 470..514 CDD:276965 18/51 (35%)
Kelch_1 517..560 CDD:396078 7/46 (15%)
KELCH repeat 517..560 CDD:276965 7/46 (15%)
AT3G27150NP_189351.1 F-box_SF 72..114 CDD:459239
NanM 145..386 CDD:442289 54/225 (24%)
KELCH repeat 202..251 CDD:276965 13/90 (14%)
KELCH repeat 254..297 CDD:276965 17/50 (34%)
KELCH repeat 302..348 CDD:276965 7/45 (16%)
Blue background indicates that the domain is not in the aligned region.

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