DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT3G10510

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_187662.1 Gene:AT3G10510 / 820215 AraportID:AT3G10510 Length:371 Species:Arabidopsis thaliana


Alignment Length:220 Identity:46/220 - (20%)
Similarity:70/220 - (31%) Gaps:91/220 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   358 VYDPR--KNKWSQGCAMLCKRSAVGVAALDDCIY-VCGGYDGVTSLN---------TVEVYYPKS 410
            |..||  |.:...||...|.     ...::|||. |...|    |||         |||      
plant    50 VASPRLYKTRSLLGCTEDCV-----YVLIEDCILEVARWY----SLNRRTKRNMPGTVE------ 99

  Fly   411 NTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGV 475
            |....::.:....:|.....:...::.:||           |||...:.|....|          
plant   100 NRLVLISSLPPMPTAASYVVVGSNIFVMGG-----------RYDWNVEEWEAQPP---------- 143

  Fly   476 ATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAAN-----------MGKL 529
                ..|.:|           ::|   :|.|.:||..|     .|.|..|           :|::
plant   144 ----SSIALC-----------IDC---RTHTTRLVADM-----PVGLMTNVSKVIDEKIYIVGRV 185

  Fly   530 WAIGGYDGESNLSTVEVYDPETDKW 554
            ||         .:|:..:|..|:||
plant   186 WA---------SATIVEFDLRTEKW 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 32/163 (20%)
KELCH repeat 329..372 CDD:276965 6/15 (40%)
KELCH repeat 376..417 CDD:276965 12/50 (24%)
KELCH repeat 423..466 CDD:276965 7/42 (17%)
KELCH repeat 470..514 CDD:276965 7/43 (16%)
Kelch_1 517..560 CDD:396078 11/49 (22%)
KELCH repeat 517..560 CDD:276965 11/49 (22%)
AT3G10510NP_187662.1 F-box_AtAFR-like 15..59 CDD:438923 4/8 (50%)
NanM 106..>201 CDD:442289 25/147 (17%)
KELCH repeat 115..164 CDD:276965 15/92 (16%)
Blue background indicates that the domain is not in the aligned region.

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