DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT3G08810

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_187493.1 Gene:AT3G08810 / 820028 AraportID:AT3G08810 Length:343 Species:Arabidopsis thaliana


Alignment Length:188 Identity:43/188 - (22%)
Similarity:72/188 - (38%) Gaps:33/188 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 VYYPK----SNTWKTV---AQMMKYRSAGGVTQLNGYVYALGGHDGLSIF------DSVERYDQA 456
            :|||.    |.:::::   .::.|.||..|.|::..|| .|....|...|      |....|::.
plant    41 LYYPTLSHVSESFRSLLASPELYKARSLSGNTEICLYV-CLRCSTGYRWFSLSRKPDQTLTYEER 104

  Fly   457 EDVWVKM--------SPMLNRRCRLGVATLNGKIY-VCGGYCGNSFLRSVECYDPQTDTWKLVTP 512
            :.....:        ||.:.....:.|.:   .|| :||.....|...||...|.|:.||:....
plant   105 KSSGYALARVPIPGGSPNVRSSSLVAVGS---DIYNICGSINKASSSSSVSILDCQSHTWREAPS 166

  Fly   513 MNCKRSRVALAANMGKLWAIGGYDGESNLSTVEVYDPETDKWTFMPPMCAHSGGVGAG 570
            :..:.|.::.:...|.....|..|...|...|..|:.:..:|.       |..|:|||
plant   167 LPVELSSISASVRDGNQGGHGYSDSRKNSFKVFAYNSKEGRWD-------HLVGLGAG 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 30/126 (24%)
KELCH repeat 329..372 CDD:276965
KELCH repeat 376..417 CDD:276965 4/18 (22%)
KELCH repeat 423..466 CDD:276965 12/56 (21%)
KELCH repeat 470..514 CDD:276965 12/44 (27%)
Kelch_1 517..560 CDD:396078 8/42 (19%)
KELCH repeat 517..560 CDD:276965 8/42 (19%)
AT3G08810NP_187493.1 F-box_AtAFR-like 24..66 CDD:438923 5/24 (21%)
Kelch_6 126..169 CDD:404790 12/45 (27%)
Blue background indicates that the domain is not in the aligned region.

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