DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT3G06570

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_566286.1 Gene:AT3G06570 / 819836 AraportID:AT3G06570 Length:390 Species:Arabidopsis thaliana


Alignment Length:451 Identity:82/451 - (18%)
Similarity:151/451 - (33%) Gaps:131/451 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 QNLMVGASFLQLSNVRDACASFL--ISRFHPHNVLGIRTFADSMIC---RQLIDAADKYIDQNFA 171
            |:....|||..|.:  |...|.:  :.|.:...|        |::|   |.|:.:.:.|..::.:
plant    18 QSQSASASFQSLPD--DLILSIVARVPRLYHRTV--------SLVCKSFRSLLVSPELYKARSVS 72

  Fly   172 KVSQSEEFLALDC---EQLLELMRRDELNVRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVRLP 233
            ..::|..:|::.|   .::..|.|:.:..:.|.|             |:::.:.....||.|..|
plant    73 GHTESCLYLSIACYPDYRMFTLCRKPDQTLTTSE-------------EEEKKKSNGYYLAPVPDP 124

  Fly   234 LLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGG 298
            ...|.:.:..|.                                           ....||.:.|
plant   125 DSHPVYFSSLVT-------------------------------------------VGSDIYNIAG 146

  Fly   299 LASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLST----VEVY 359
                ..:.|.|.|.|..:..|:...::.:..:.|..:||:.|::..|.:...|...:    .||.
plant   147 ----SHASSNVSILDCRSNTWREAPRLGVELTSVSASVLDRKIFVVGMYADDEESESKNDFFEVL 207

  Fly   360 DPRKNKWSQ---GCA------MLCKRSAV-GVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWK 414
            |...:.|..   .|:      :.|:.:.: |...:...|     :.||.:.|:      |.:.|:
plant   208 DTETHTWDPQPFNCSETKDKFLNCRTAFIDGKFLVKPWI-----HRGVVAYNS------KESRWE 261

  Fly   415 TV-AQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATL 478
            .| .:|..........|::..:|       |:....:..||.|.:.|..:..:|    .||....
plant   262 PVQTKMAMSMFNDSYCQIHNVIY-------LAFDGRIRWYDDALNCWGDVQGLL----ELGNIPH 315

  Fly   479 NGKIYVCGGYCGN---SFLRSVECYDPQTD--TWKLVTPMNCKRSRVALAANMGKLWAIGG 534
            .........|.||   .:.|    |.|..|  .||::.   |  :.:||.....  |.|.|
plant   316 GPSCVRLADYRGNIAVFWFR----YLPDNDDYKWKMIW---C--AEIALERRTS--WEIWG 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 7/26 (27%)
PHA03098 36..510 CDD:222983 76/425 (18%)
KELCH repeat 329..372 CDD:276965 11/55 (20%)
KELCH repeat 376..417 CDD:276965 8/42 (19%)
KELCH repeat 423..466 CDD:276965 7/42 (17%)
KELCH repeat 470..514 CDD:276965 11/48 (23%)
Kelch_1 517..560 CDD:396078 5/18 (28%)
KELCH repeat 517..560 CDD:276965 5/18 (28%)
AT3G06570NP_566286.1 F-box_AtAFR-like 29..69 CDD:438923 10/49 (20%)
NanM 117..>214 CDD:442289 23/143 (16%)
PHA03098 <126..313 CDD:222983 41/255 (16%)
KELCH repeat 130..169 CDD:276965 9/85 (11%)
KELCH repeat 173..218 CDD:276965 10/44 (23%)

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