DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and LRB1

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_566069.1 Gene:LRB1 / 819234 AraportID:AT2G46260 Length:561 Species:Arabidopsis thaliana


Alignment Length:365 Identity:76/365 - (20%)
Similarity:163/365 - (44%) Gaps:80/365 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LSDNSQ-----------VEDQYFVYKHDKLFGE----SFPLFKEIRRMGKLCDVTLKVEDQTFSA 52
            |:||:|           ::|:......:.|.|:    |.|      ..|..|...::|::...|:
plant   100 LTDNNQPDMDDAPGGDNLDDEGEAMVEEALSGDDDASSEP------NWGIDCSTVVRVKELHISS 158

  Fly    53 HRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIEPSALESLINYVYSGQVRIDN-QNVQNLMV 116
              .:|||..|:||.:|:|.|.||..:.:|::.||.|..||..|:|::||..:.:.. ..:.::::
plant   159 --PILAAKSPFFYKLFSNGMRESEQRHVTLRISAQEEGALMELLNFMYSNSLSVTTAPALLDVLM 221

  Fly   117 GASFLQLSNVRDACASFLISR-FHPHNVLGIRTFADSMICRQ----LIDAADKYIDQNFAKVSQ- 175
            .|...::::....|:..|.:. ..|.:.|.......|::..:    |.|||.:::...:..::: 
plant   222 AADKFEVASCMRYCSRLLRNMPMTPDSALLYLELPSSVLMAEAVQPLTDAAKQFLASRYKDITKF 286

  Fly   176 SEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVK--YA--EDKRSELFPQVLAAVRLPLLS 236
            .:|.:||....:..::..|:|.:.:|:.:::..:||.:  |:  ||:|..|..::...:|.|.::
plant   287 HDEVMALPLAGIEAILSSDDLQIASEDAVYDFVLKWARGQYSSLEDRREILGSRLALYIRFPYMT 351

  Fly   237 PQFL---------ADRVAREELI-------RSSHQCRDLLDEAKDFHLMPERRGLLQSFRTR--- 282
            .:.|         ...||.::::       .:.|:.|.|..|..|   ...||.:.::::.|   
plant   352 CRKLKKVLTCSDFEHEVASKQVLEALFFKAEAPHRQRILAAEGSD---SMNRRFIERAYKYRPVK 413

  Fly   283 --------------------QRSGEFFTGQIYA----VGG 298
                                :.:|.|.:|::|:    :||
plant   414 VVEFELPRPQCVVYLDLKREECAGLFPSGRVYSQAFHLGG 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 32/121 (26%)
PHA03098 36..510 CDD:222983 67/317 (21%)
KELCH repeat 329..372 CDD:276965
KELCH repeat 376..417 CDD:276965
KELCH repeat 423..466 CDD:276965
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
LRB1NP_566069.1 BTB_POZ_ZBTB_KLHL-like 144..226 CDD:349497 25/83 (30%)
BACK 266..351 CDD:197943 19/84 (23%)
Blue background indicates that the domain is not in the aligned region.

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