DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT2G44030

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_181931.1 Gene:AT2G44030 / 819008 AraportID:AT2G44030 Length:380 Species:Arabidopsis thaliana


Alignment Length:262 Identity:61/262 - (23%)
Similarity:93/262 - (35%) Gaps:76/262 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 FNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDD-------------CIYVCGGYDGVT 398
            ||...|:|  ..:||        ...|..:|...:.||.|             |:|||      .
plant    28 FNCLSRVS--RTHDP--------ILSLVSKSFRSLLALPDLEAERFRILKNETCLYVC------L 76

  Fly   399 SLNTVEVYYPKSNTWKTVAQMMKYR--------------SAGGVTQLNGYVYALGGHDGLSIFDS 449
            :||......|   :|..::|..|::              :...|......:|.|||      |.:
plant    77 NLNNNNNPNP---SWFILSQTPKHKLIPLPSLPYPDPHPNCSTVVSTGSEIYLLGG------FVA 132

  Fly   450 VER-------YDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLRSV---ECYDPQT 504
            .|:       .|.....|.::..|...|.......::|||.|.|| |.:.:..||   |.|||.|
plant   133 KEKRSRRAYVLDCKSHQWRRLPKMRIARKEAAANVIDGKINVYGG-CSSEYHNSVNWGEIYDPMT 196

  Fly   505 DTWKL----------VTPMNCKRSRVALAANMGKLWAIGGYDGESNLSTVEVYDPETDKWTFMPP 559
            .||:.          |.|....:..:|. .:.|.|.:...|| .:.:.|:: |:...||....|.
plant   197 QTWEPFPEGALNKEGVIPCALIKDGIAF-PDCGLLISGKVYD-TTTMDTLD-YNTPMDKLDLCPN 258

  Fly   560 MC 561
            :|
plant   259 VC 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045
PHA03098 36..510 CDD:222983 48/209 (23%)
BACK 143..245 CDD:285009
Kelch 292..339 CDD:128874
KELCH repeat 329..372 CDD:276965 6/24 (25%)
Kelch 340..386 CDD:128874 10/38 (26%)
KELCH repeat 376..417 CDD:276965 12/53 (23%)
Kelch 387..433 CDD:128874 11/59 (19%)
KELCH repeat 423..466 CDD:276965 9/63 (14%)
Kelch 435..480 CDD:128874 10/51 (20%)
Kelch_1 469..514 CDD:279660 19/57 (33%)
KELCH repeat 470..514 CDD:276965 19/56 (34%)
Kelch_1 517..560 CDD:279660 10/42 (24%)
KELCH repeat 517..560 CDD:276965 10/42 (24%)
AT2G44030NP_181931.1 F-box 19..64 CDD:279040 11/45 (24%)
KELCH repeat 112..157 CDD:276965 9/50 (18%)
Kelch_6 115..160 CDD:290672 10/50 (20%)
Kelch_1 159..204 CDD:279660 17/45 (38%)
KELCH repeat 160..204 CDD:276965 17/44 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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