DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and NSP2

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001189663.1 Gene:NSP2 / 817869 AraportID:AT2G33070 Length:473 Species:Arabidopsis thaliana


Alignment Length:313 Identity:82/313 - (26%)
Similarity:125/313 - (39%) Gaps:51/313 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 SGEFFT---GQIYAVGG-----LASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVG-------- 333
            ||..|.   |:|....|     |.|.|..:|:     |.|.|.: |:.:.::..:.|        
plant   113 SGTKFVLQGGKIVGFHGRSTDVLHSLGAYISS-----PATPKLR-GKWIKVVVEQKGEGPGPRCS 171

  Fly   334 --VAVLNGKLYAFGG-FNGTERLST-VEVYDPRKNKWSQGCAM--LCKRSAVGV--AALDDCIYV 390
              :|.:..|:::||| ....:.:.. :.|:|.....||...|.  :...|.:||  .::...:||
plant   172 HDIAQVGNKIFSFGGELTPNQPIDKHLYVFDLETRTWSISPATGDVPNLSCLGVRMVSIGSSLYV 236

  Fly   391 CGGYDGVTSLNTVEVYYPKSNTWK---TVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVER 452
            .||.|.....|....:....|.||   .|.|....||...:|.....||..||........:::.
plant   237 FGGRDASRKYNGFYSFDTTKNEWKLLTPVEQGPTPRSFHSMTADENNVYVFGGVSATVRLKTLDA 301

  Fly   453 YDQAEDVWVKMSP---MLNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMN 514
            |:..:..||:.|.   ..:.|...|:..:.||::|..|:.|.. :..|.||||..|.|..|....
plant   302 YNIVDHKWVQCSTPGGSCSVRGGAGLEVVQGKVWVVYGFNGCE-VDDVHCYDPAQDKWTQVETFG 365

  Fly   515 ---CKRSRVALAANMGK-LWAIGG--------YDGESNLS-TVEVYDPETDKW 554
               |.|| |..:|.:|| :...||        ::|...|| .....|.||.||
plant   366 EKPCARS-VFASAVVGKHILVFGGEIAMDPKAHEGPGQLSGGTFALDTETLKW 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 64/254 (25%)
KELCH repeat 329..372 CDD:276965 10/54 (19%)
KELCH repeat 376..417 CDD:276965 12/45 (27%)
KELCH repeat 423..466 CDD:276965 11/45 (24%)
KELCH repeat 470..514 CDD:276965 15/43 (35%)
Kelch_1 517..560 CDD:396078 16/48 (33%)
KELCH repeat 517..560 CDD:276965 16/48 (33%)
NSP2NP_001189663.1 PLN02193 1..473 CDD:177844 82/313 (26%)
KELCH repeat 169..220 CDD:276965 10/50 (20%)
KELCH repeat 224..269 CDD:276965 13/44 (30%)
KELCH repeat 272..313 CDD:276965 10/40 (25%)
KELCH repeat 322..368 CDD:276965 15/46 (33%)
KELCH repeat 371..420 CDD:276965 16/48 (33%)
Blue background indicates that the domain is not in the aligned region.

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