DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT2G29820

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_180543.1 Gene:AT2G29820 / 817532 AraportID:AT2G29820 Length:388 Species:Arabidopsis thaliana


Alignment Length:352 Identity:85/352 - (24%)
Similarity:136/352 - (38%) Gaps:74/352 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 QLLELMRRDELNVRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELI 250
            ::|:....|:.|...:|            .||.::|...:.:..:|..|..|:.|.:|     ||
plant     6 EILDGPNGDDPNNNPQE------------GEDNQNENPQEEVENLRNLLELPEELIER-----LI 53

  Fly   251 RSSHQCR----DLLDEAKDFHLMPERRGLLQS---FRTRQRSGEFFTGQIYAVGGLASTGESVST 308
            ....:|.    .|:  ::||      |.::.|   ||||...| |....:||:.|...|      
plant    54 AHIPRCYYPYISLV--SRDF------RQVITSDKLFRTRSLLG-FNEPVLYALIGSTQT------ 103

  Fly   309 VEIYDPLT---KKW-----KMGEQMSMMRSRVGVAV--LNGKLYAFGGFNG-TERLSTVEVYDPR 362
                 ||:   .:|     ::....|:....:|.||  :..|:|..||..| ...:|||.|.|.|
plant   104 -----PLSWFFLRWSNFPLELHRIRSLPTVLLGAAVVTIGYKMYVMGGTIGLNHHVSTVIVIDCR 163

  Fly   363 KNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMM-KYRSAG 426
            .:.|:....|...|.......:...|||.||.. ....:.|||:...:.:|:||:.:. ...||.
plant   164 NHTWNYLPDMKRARYRAAAGEIGGRIYVIGGRK-KQDADWVEVFNATTESWETVSSVCPNDASAN 227

  Fly   427 GV----TQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVK--MSPMLNRRCR-LGVATLNGK-IY 483
            ||    ..:.|.::||   |....|    .|...:.:|..  ::..|.|... |...|:.|: :|
plant   228 GVFSTYVVMQGRIFAL---DRWGCF----AYKPVQGLWQSWGVASELTRFWHPLSSFTVIGELLY 285

  Fly   484 VCGGYCGNSFLRSVECYDPQTDTWKLV 510
            .....|  |....:..|.|....|:.|
plant   286 TVDLTC--SLGHPIVVYYPNESVWRPV 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 84/350 (24%)
KELCH repeat 329..372 CDD:276965 15/45 (33%)
KELCH repeat 376..417 CDD:276965 11/40 (28%)
KELCH repeat 423..466 CDD:276965 11/48 (23%)
KELCH repeat 470..514 CDD:276965 10/43 (23%)
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
AT2G29820NP_180543.1 F-box_SF <53..84 CDD:459239 9/38 (24%)
NanM 121..>219 CDD:442289 29/98 (30%)
KELCH repeat 131..173 CDD:276965 15/41 (37%)
KELCH repeat 177..221 CDD:276965 12/44 (27%)
KELCH repeat 269..310 CDD:276965 10/42 (24%)
Blue background indicates that the domain is not in the aligned region.

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