DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT2G29780

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_180539.1 Gene:AT2G29780 / 817528 AraportID:AT2G29780 Length:398 Species:Arabidopsis thaliana


Alignment Length:286 Identity:61/286 - (21%)
Similarity:92/286 - (32%) Gaps:99/286 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 QIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTV 356
            ::|.:|||......|.||.:.|...........|...|.|....|:|||:|..||          
plant   148 KMYVIGGLIGPNNPVKTVFVIDCRVHTCNYLPTMHRARYRAVAEVINGKIYVIGG---------- 202

  Fly   357 EVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMK 421
                             |::      ..||.|.|   :|.||.:            |.||.....
plant   203 -----------------CEK------RYDDWIEV---FDVVTGI------------WSTVPDRSH 229

  Fly   422 YRSA----GGVTQ--LNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNG 480
            :.|:    |.||.  :...:|.|....|| ::|.::...::.::...:.....:.|    ..:..
plant   230 FMSSLPGGGFVTSVVMQNKIYILDATCGL-VYDPIDGTWESGELGTTLKSYWYKPC----CVIED 289

  Fly   481 KIYVCGGYC--GNSFLRSVECYDPQTDTWKLVTPM--------------NCKRSRVALAANMGKL 529
            .:|....||  |:    .:..|||....|   |||              .||.:...     |||
plant   290 LLYSFDPYCLQGS----PINVYDPNVMVW---TPMMGTGIRAFPDLDYFECKMANFG-----GKL 342

  Fly   530 WAIGG-YDGESNLSTVEVYDPETDKW 554
            ...|. |:           :|.||.|
plant   343 MVFGATYN-----------NPVTDTW 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 47/225 (21%)
KELCH repeat 329..372 CDD:276965 9/42 (21%)
KELCH repeat 376..417 CDD:276965 9/40 (23%)
KELCH repeat 423..466 CDD:276965 9/48 (19%)
KELCH repeat 470..514 CDD:276965 12/59 (20%)
Kelch_1 517..560 CDD:396078 9/39 (23%)
KELCH repeat 517..560 CDD:276965 9/39 (23%)
AT2G29780NP_180539.1 F-box_SF 48..88 CDD:459239
NanM 132..274 CDD:442289 38/174 (22%)
KELCH repeat 139..181 CDD:276965 8/32 (25%)
KELCH repeat 185..226 CDD:276965 20/88 (23%)
Blue background indicates that the domain is not in the aligned region.

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