DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT2G29770

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_180538.1 Gene:AT2G29770 / 817527 AraportID:AT2G29770 Length:387 Species:Arabidopsis thaliana


Alignment Length:277 Identity:62/277 - (22%)
Similarity:101/277 - (36%) Gaps:91/277 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 IYAVGGLASTGESVSTVEIYD---------PLTKKWKMGEQMSMMRSRVGVA--VLNGKLYAFGG 346
            :|.:||.....:..|.|.|.|         |           .|.|:||..|  |::|::|..||
plant   137 MYVIGGHNRLHQPTSNVSIIDLRFHTSCSLP-----------RMQRTRVYAAAGVIDGRIYVIGG 190

  Fly   347 FNGTERLS-TVEVYDPRKNKWS-----QGC--AMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTV 403
            .  .:|.. .:||:|.....||     :.|  :.|.....|....:.:.||:.....|.      
plant   191 C--VKRNDHWIEVFDIENRIWSSVPHHRYCNGSSLRGEGFVTSVVMQNKIYILDSLFGF------ 247

  Fly   404 EVYYPKSNTWKTVAQMMKYRSAGGVTQ-----------LNGYVYALG-----GHDGLSIFDSVER 452
             .|.|:..|         .:|.|..||           :.|.:|.:.     ||       ::..
plant   248 -AYEPRHGT---------LQSLGFETQFMFLWRDPCCVIEGLLYCIDPMCVLGH-------AIVV 295

  Fly   453 YDQAEDVW--VKMSPMLNRRC--RLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPM 513
            ||..|.:|  ||.:.:|.:.|  :..:|...||:.:.|  |.||..|.::      |.|.:...:
plant   296 YDPNELIWRRVKGAYILPKFCYYQCKMANFGGKLAILG--CSNSSQRGLK------DVWFVEIEL 352

  Fly   514 NCKRSRVALAANMGKLW 530
            ..::|        |::|
plant   353 ENRQS--------GEIW 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 59/255 (23%)
KELCH repeat 329..372 CDD:276965 16/52 (31%)
KELCH repeat 376..417 CDD:276965 7/40 (18%)
KELCH repeat 423..466 CDD:276965 14/60 (23%)
KELCH repeat 470..514 CDD:276965 11/45 (24%)
Kelch_1 517..560 CDD:396078 3/14 (21%)
KELCH repeat 517..560 CDD:276965 3/14 (21%)
AT2G29770NP_180538.1 F-box_SF 35..76 CDD:459239
NanM 81..350 CDD:442289 59/256 (23%)
KELCH repeat 126..169 CDD:276965 8/42 (19%)
KELCH repeat 173..213 CDD:276965 14/41 (34%)
Blue background indicates that the domain is not in the aligned region.

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