DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT2G29770

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_180538.1 Gene:AT2G29770 / 817527 AraportID:AT2G29770 Length:387 Species:Arabidopsis thaliana


Alignment Length:277 Identity:62/277 - (22%)
Similarity:101/277 - (36%) Gaps:91/277 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 IYAVGGLASTGESVSTVEIYD---------PLTKKWKMGEQMSMMRSRVGVA--VLNGKLYAFGG 346
            :|.:||.....:..|.|.|.|         |           .|.|:||..|  |::|::|..||
plant   137 MYVIGGHNRLHQPTSNVSIIDLRFHTSCSLP-----------RMQRTRVYAAAGVIDGRIYVIGG 190

  Fly   347 FNGTERLS-TVEVYDPRKNKWS-----QGC--AMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTV 403
            .  .:|.. .:||:|.....||     :.|  :.|.....|....:.:.||:.....|.      
plant   191 C--VKRNDHWIEVFDIENRIWSSVPHHRYCNGSSLRGEGFVTSVVMQNKIYILDSLFGF------ 247

  Fly   404 EVYYPKSNTWKTVAQMMKYRSAGGVTQ-----------LNGYVYALG-----GHDGLSIFDSVER 452
             .|.|:..|         .:|.|..||           :.|.:|.:.     ||       ::..
plant   248 -AYEPRHGT---------LQSLGFETQFMFLWRDPCCVIEGLLYCIDPMCVLGH-------AIVV 295

  Fly   453 YDQAEDVW--VKMSPMLNRRC--RLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPM 513
            ||..|.:|  ||.:.:|.:.|  :..:|...||:.:.|  |.||..|.::      |.|.:...:
plant   296 YDPNELIWRRVKGAYILPKFCYYQCKMANFGGKLAILG--CSNSSQRGLK------DVWFVEIEL 352

  Fly   514 NCKRSRVALAANMGKLW 530
            ..::|        |::|
plant   353 ENRQS--------GEIW 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045
PHA03098 36..510 CDD:222983 59/255 (23%)
BACK 143..245 CDD:285009
Kelch 292..339 CDD:128874 14/56 (25%)
KELCH repeat 329..372 CDD:276965 16/52 (31%)
Kelch 340..386 CDD:128874 12/53 (23%)
KELCH repeat 376..417 CDD:276965 7/40 (18%)
Kelch 387..433 CDD:128874 10/56 (18%)
KELCH repeat 423..466 CDD:276965 14/60 (23%)
Kelch 435..480 CDD:128874 12/53 (23%)
Kelch_1 469..514 CDD:279660 11/46 (24%)
KELCH repeat 470..514 CDD:276965 11/45 (24%)
Kelch_1 517..560 CDD:279660 3/14 (21%)
KELCH repeat 517..560 CDD:276965 3/14 (21%)
AT2G29770NP_180538.1 Kelch_1 126..170 CDD:279660 8/43 (19%)
KELCH repeat 126..169 CDD:276965 8/42 (19%)
Kelch_1 173..213 CDD:279660 14/41 (34%)
KELCH repeat 173..213 CDD:276965 14/41 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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