DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT2G22030

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_179794.1 Gene:AT2G22030 / 816738 AraportID:AT2G22030 Length:383 Species:Arabidopsis thaliana


Alignment Length:405 Identity:103/405 - (25%)
Similarity:145/405 - (35%) Gaps:138/405 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 AEDKRSELFPQVLAAVRLPLLSPQFLADRVAR-------------EELIRS---SHQCRDLLDEA 263
            |.|:.|.||..:...|.|..|:      ||:|             :.|:||   :|. |.|:  .
plant    18 AADQSSLLFSSLPYDVVLNCLA------RVSRRYYPNLSCVSKSFQSLVRSPELAHM-RSLI--G 73

  Fly   264 KD---------------------FHLMP--ERRGLLQSFRTRQRSGEFFT------------GQI 293
            ||                     |.|.|  ::..:|.||       :.|:            .:|
plant    74 KDDPVVYVCFSDTKPFLGRRLDWFTLNPNEKKTSVLNSF-------QVFSYYMLYCPSVSIGSKI 131

  Fly   294 YAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEV 358
            |.|||...  :.:..:.|:|..:.:..:|..|...|...||||:|||||..||..  |....|||
plant   132 YFVGGCMY--KCLPGLLIFDSWSGELCVGPSMKEARMLPGVAVVNGKLYVMGGCR--EDQIQVEV 192

  Fly   359 YDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYR 423
            :||....|.           ||..:.|.                 ||.|.|.        :|:|.
plant   193 FDPNSQTWE-----------VGPLSSDG-----------------EVRYGKG--------LMRYG 221

  Fly   424 SAGGVTQ---LNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRC--RLGVATLNGKIY 483
            :.  ||:   |.|.||.:...||..|.     || .:|...:...|.:.:.  |.||..:|..||
plant   222 AI--VTEAVALEGKVYCMSYKDGSHII-----YD-TKDGKCETFLMADGKAWRRGGVCVVNSVIY 278

  Fly   484 VCGGYCGNSFLRSVECYDPQTDTWKLVTPMN----CKRSRVALAANMGKLWAIGGYDGESNLSTV 544
            |   |..|   ..|..|||:...|:.|..:|    .....|.:....|||..:.|.      :|.
plant   279 V---YYIN---LGVMWYDPKDKVWREVKGLNKLDYKSIDMVGMVDCNGKLGFLWGN------NTR 331

  Fly   545 EVYDPETDK--WTFM 557
            |:....|:|  |..|
plant   332 EIISGRTEKRIWCEM 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 90/350 (26%)
KELCH repeat 329..372 CDD:276965 19/42 (45%)
KELCH repeat 376..417 CDD:276965 7/40 (18%)
KELCH repeat 423..466 CDD:276965 12/45 (27%)
KELCH repeat 470..514 CDD:276965 15/45 (33%)
Kelch_1 517..560 CDD:396078 11/43 (26%)
KELCH repeat 517..560 CDD:276965 11/43 (26%)
AT2G22030NP_179794.1 F-box_AtAFR-like 25..69 CDD:438923 12/50 (24%)
KELCH repeat 121..161 CDD:276965 8/41 (20%)
NanM <124..299 CDD:442289 64/228 (28%)
KELCH repeat 165..206 CDD:276965 21/53 (40%)
KELCH repeat 266..303 CDD:276965 15/42 (36%)
Blue background indicates that the domain is not in the aligned region.

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