DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT2G21680

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_179761.4 Gene:AT2G21680 / 816706 AraportID:AT2G21680 Length:429 Species:Arabidopsis thaliana


Alignment Length:419 Identity:81/419 - (19%)
Similarity:123/419 - (29%) Gaps:165/419 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 MKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELI--------RSSHQCRDLLDEAKD 265
            :|..|..||:..:|..:|..::.:|             ||||        |..|....|:  .:.
plant    19 IKKPKKEEDRNKKLKEKVQVSLPIP-------------EELILRCFLLVRRCHHPSLSLV--CRS 68

  Fly   266 FHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRS 330
            ||.:..:                                      :||.              |.
plant    69 FHSLMSK--------------------------------------LYDD--------------RL 81

  Fly   331 RVGVAVLNGKLYAFGGFNGTERLSTVEVY-DPRKNKWSQGCAMLCKRSAV-------GVAALDDC 387
            |:|..  ...|||:.||...|..|...:: .|.:|..:.....|||..::       .|..:...
plant    82 RLGYT--ENVLYAYVGFPPVENPSWYILHRKPYRNLPNTISLKLCKIDSLPPMPWGSTVVTIGSD 144

  Fly   388 IYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVER 452
            |||.||..|...|..|.|.|.|.             .:||   ..|.....|||.|......|..
plant   145 IYVIGGRVGEKLLEDVGVGYNKP-------------ISGG---RRGETSIRGGHAGERRISDVTH 193

  Fly   453 YDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGG------------------------------ 487
            .:.....:..:..|...|||.....::|||||.||                              
plant   194 INCRFHEYRSLPSMKMARCRAAAGVIDGKIYVIGGRKVRTSDWVEVFDLKKQSWSSVPGPYPEAF 258

  Fly   488 ---------------YCGNSFLRSVECYDPQTDTWKLVT--PM-------NCKRSRVALAANMGK 528
                           || ....|::..|||:...|:..|  |:       :|....:....|. .
plant   259 GRGEFLTYAVMKEKIYC-LDLTRNIHIYDPKESKWESWTHGPLSASWNDSSCVVDNLLFCINT-S 321

  Fly   529 LWAIGGYDGESNLSTVEVYDPETDKWTFM 557
            ::.:|.        .:::||||...|.::
plant   322 VYFLGW--------PIKIYDPEKKTWFYL 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 71/361 (20%)
KELCH repeat 329..372 CDD:276965 12/43 (28%)
KELCH repeat 376..417 CDD:276965 12/47 (26%)
KELCH repeat 423..466 CDD:276965 8/42 (19%)
KELCH repeat 470..514 CDD:276965 19/97 (20%)
Kelch_1 517..560 CDD:396078 7/41 (17%)
KELCH repeat 517..560 CDD:276965 7/41 (17%)
AT2G21680NP_179761.4 F-box_SF 40..80 CDD:459239 12/106 (11%)
NanM <128..241 CDD:442289 31/128 (24%)
KELCH repeat 135..207 CDD:276965 20/87 (23%)
NanM 202..>339 CDD:442289 27/146 (18%)
KELCH repeat 211..255 CDD:276965 10/43 (23%)
Blue background indicates that the domain is not in the aligned region.

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