DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT2G03460

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_178445.2 Gene:AT2G03460 / 814875 AraportID:AT2G03460 Length:257 Species:Arabidopsis thaliana


Alignment Length:196 Identity:44/196 - (22%)
Similarity:70/196 - (35%) Gaps:29/196 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 ESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFG----GFNGTERLSTVEVYDPRKN 364
            ||.|:|.|.|..:..|:....:......|..:||:.|:|..|    |.:.|.: ::.||:|....
plant    14 ESSSSVSILDCRSHTWREAPSLREGLCSVSSSVLDRKIYVAGSCLDGDSYTYK-NSFEVFDTETQ 77

  Fly   365 KWSQGCAMLCKRS-----AVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRS 424
            .|... .:.|.::     ..|.|.:|...:|.    .|........|..|...|..|.|.|.:..
plant    78 FWDPD-TITCSKTEGDFYGCGTACIDGEFHVV----PVGQKREAVAYNSKEGRWDMVGQQMDHYK 137

  Fly   425 AGGVTQLNGYVYALGGHDGLSIFDSVER-YDQAEDVWVKMS-----PMLNRRCRLGVATLNGKIY 483
            .....::...:|        |....|.| ||....:|..:.     ||......:.:|...||:.
plant   138 FSASCEIQNVLY--------SCTHGVFRWYDTNAMMWRDLKGLVGLPMFGSGANVKLADYGGKLT 194

  Fly   484 V 484
            |
plant   195 V 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045
PHA03098 36..510 CDD:222983 44/196 (22%)
BACK 143..245 CDD:285009
Kelch 292..339 CDD:128874 10/34 (29%)
KELCH repeat 329..372 CDD:276965 12/46 (26%)
Kelch 340..386 CDD:128874 12/54 (22%)
KELCH repeat 376..417 CDD:276965 8/45 (18%)
Kelch 387..433 CDD:128874 8/45 (18%)
KELCH repeat 423..466 CDD:276965 7/48 (15%)
Kelch 435..480 CDD:128874 10/50 (20%)
Kelch_1 469..514 CDD:279660 4/16 (25%)
KELCH repeat 470..514 CDD:276965 4/15 (27%)
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
AT2G03460NP_178445.2 PHA03098 <29..149 CDD:222983 25/125 (20%)
KELCH repeat 39..89 CDD:276965 13/51 (25%)
KELCH repeat 93..130 CDD:276965 8/40 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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